PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022750456.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 660aa    MW: 72895.2 Da    PI: 5.9898
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022750456.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS429.42.9e-1312946591374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar...svselykalppsetseknsseelaalklfsevsPilk 92 
                     l +lLl+cAeav+++d  la++++ +l++ ++p gd+mqR+a++fteAL+arla      ++++ a +p ++ + ns e+l+++++ ++++P++k
  XP_022750456.1 294 LLHLLLACAEAVAKEDYLLARKYIHHLNQVVTPLGDSMQRVASCFTEALSARLAAtitANPSTSTAPKPFTSFPLNSLEVLKIYQIVYQACPYVK 388
                     579***************************************************9422234455555555666667******************* PP

            GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrle 187
                     f+h++aNqaI ea+e eervH+iD+di qG QWpa++qaLa+Rp+g+p lRiTgvg+    s e+++etg+ L+++A++l++pfef++ + ++le
  XP_022750456.1 389 FAHFIANQAIFEAFEAEERVHVIDLDILQGYQWPAFMQALAARPSGAPFLRITGVGP----SIETVKETGRCLTELAHSLHIPFEFHP-IGEQLE 478
                     *********************************************************....9**************************.7***** PP

            GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseer 282
                     d+++++++ + gEalaVn v +lh+++    +l     ++L ++++  P++v++ve+ea+hn++ Fl rfleal+yysa+fdsl+a++p++s +r
  XP_022750456.1 479 DIKPNMFNRRVGEALAVNAVNRLHQVP--GNCLG----NLLAMIRDQAPNIVTLVEKEASHNGPYFLGRFLEALHYYSAIFDSLDATFPPDSAQR 567
                     **************************9..44444....5******************************************************** PP

            GRAS 283 ikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +kvE+ ++++ei+n+vaceg+er++rhe+lekWr+ +e  GFk vpls +a++q k ll  ++ dgyr+ e++g+l+lgW dr+++++SaWr
  XP_022750456.1 568 AKVEQYIFAPEIRNIVACEGSERVARHERLEKWRKLMEGKGFKGVPLSANAVTQSKILLGLYSCDGYRLTEDKGCLLLGWLDRAILAASAWR 659
                     *******************************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 660 aa     Download sequence    
MINSRCCSMG SIKSEDSCES IAKSNKTATS SGLEQNSLTP PSLNFPAVKF ELDGDVEGQS  60
PDSSLWETFF SDNFDSDFMI SSPVSRNLPS IQISSSNFSN LHARQGQSLS GSSPPRFSSQ  120
LGSFSSNHKG KGQSPLHRVF NSPNNQFMQV ESLSLPSIEE FLDDYQKDGY GEYPTTKISG  180
IGNSNNMFEM PTTVPAMLDC MPMPNSSRFC ASASETSSSA GCSQLTHEQH YQVNSVSREP  240
LSQQLQQEQQ QEKQQSAAAA HKQQQQQQHE NLGHTLMVPI PIGSEQEQDS GLQLLHLLLA  300
CAEAVAKEDY LLARKYIHHL NQVVTPLGDS MQRVASCFTE ALSARLAATI TANPSTSTAP  360
KPFTSFPLNS LEVLKIYQIV YQACPYVKFA HFIANQAIFE AFEAEERVHV IDLDILQGYQ  420
WPAFMQALAA RPSGAPFLRI TGVGPSIETV KETGRCLTEL AHSLHIPFEF HPIGEQLEDI  480
KPNMFNRRVG EALAVNAVNR LHQVPGNCLG NLLAMIRDQA PNIVTLVEKE ASHNGPYFLG  540
RFLEALHYYS AIFDSLDATF PPDSAQRAKV EQYIFAPEIR NIVACEGSER VARHERLEKW  600
RKLMEGKGFK GVPLSANAVT QSKILLGLYS CDGYRLTEDK GCLLLGWLDR AILAASAWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.15e-96GRAS family protein