PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022750701.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 347aa MW: 39379.3 Da PI: 7.0633

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022750701.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.2	3.3e-17	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+ +++q+G+g +W + ++++g++R++k+c++rw++yl XP_022750701.1 14 KGPWSPEEDAKLKAYIEQHGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	38.6	2.6e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd+++ + G++ W+ Ia+ ++ gRt++++k++w++ XP_022750701.1 69 GGFSEEEDKIICSLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDAKLKAYIE QHGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEDKIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGK 120 QRREQQSRRG NSLKQELKRG NGDTLIPDHK YNNNERPYWP ELPVLVAPMP NSSQEQRIDS 180 QASVRRLLIK LGGRFSDDDQ VINDASTTLH DQFPKDSSST AHLQLYEQTL QMPSSSYPMD 240 ALNNNIGTQF VNSQYTIDGP NLHMLEGQIS FSSELQEMGY SNPQRLDGME FLYGEDMGRA 300 VDKYCCESIG WPGTDTSSLL CPPVASEYGD IQQEVLQEFA FNELRQP

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MGRAPCCDKA NVKKGPWSPE EDAKLKAYIE QHGTGGNWIA LPQKIGLKRC GKSCRLRWLN  60
YLRPNIKHGG FSEEEDKIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGK  120
QRREQQSRRG NSLKQELKRG NGDTLIPDHK YNNNERPYWP ELPVLVAPMP NSSQEQRIDS  180
QASVRRLLIK LGGRFSDDDQ VINDASTTLH DQFPKDSSST AHLQLYEQTL QMPSSSYPMD  240
ALNNNIGTQF VNSQYTIDGP NLHMLEGQIS FSSELQEMGY SNPQRLDGME FLYGEDMGRA  300
VDKYCCESIG WPGTDTSSLL CPPVASEYGD IQQEVLQEFA FNELRQP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	5e-76	MYB family protein