PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022751126.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MIKC_MADS

Protein Properties

Length: 224aa MW: 25447.9 Da PI: 5.8049

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022751126.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	91.1	5.4e-29	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n + rqvtfskRr g++KKAeELSvLCda+va+iifsstgkl+ey+s XP_022751126.1 9 KKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEYAS 59 68***********************************************86 PP
2	K-box	43.5	1.4e-15	105	171	32	98
K-box 32 qreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +++R++ Ge+Le L+++eLqqLe+ Le +l+++ +kK + ++++i++l+ k +l een++L+ ++ XP_022751126.1 105 SHQLRQMRGEELEGLNIEELQQLEKFLEAGLSRVIEKKGQRIIREINDLKTKGMQLMEENERLKLEI 171 3789***********************************************************9877 PP

Sequence ? help Back to Top
Protein Sequence Length: 224 aa Download sequence
MAREKIQIKK IDNATARQVT FSKRRRGLFK KAEELSVLCD ADVALIIFSS TGKLFEYASS 60 SMKEILERYN LRSKNLEKLE QPSLELQLVE NSNHSMLSME VAEKSHQLRQ MRGEELEGLN 120 IEELQQLEKF LEAGLSRVIE KKGQRIIREI NDLKTKGMQL MEENERLKLE ISNGRREVAG 180 DSENVFCEEG QSSESVTNVC TSNATPHDHE SSNTSLKLGL PFSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22540.1	6e-99	MIKC_MADS family protein