PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022751164.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 359aa MW: 40674.2 Da PI: 6.5173

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022751164.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42.9	8.7e-14	183	229	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++Er+RR+++ ++f L +l+P + kK +Ka+iL A++Y+k+Lq XP_022751164.1 183 EHVIAERKRREKLSQRFISLSTLIPGL-----KKTDKASILGDAIKYLKQLQ 229 699**********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MEIASAKWLP ELEMEDPTFF PQYQMMNPID YSFDDLNFQS FSSESYSTYP NIDQKISHNN 60 INGSCIEASL QVEDYFKRPM KQLKTNSWNP CITENIPPKA SSSSSSHIIS FDNSNSSPVI 120 SQQYYGTDCA VKPKNEVGWD GNMGYFPSSI FQSASKDQFC SPKFGQVSKR AGSLTRTPLH 180 AQEHVIAERK RREKLSQRFI SLSTLIPGLK KTDKASILGD AIKYLKQLQE RVTTLEEQVA 240 KKTVESVIFV RKTQIYADDE ISSCDENFDS QSNKPFPEIE AKVSDKDVLI RIHCEKNKGC 300 ISNIINEIEK LHLSVLNTNV LPFGQATLDI TIVAQMEAEF SMKVKDLVKS LRLALLKFM

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MEIASAKWLP ELEMEDPTFF PQYQMMNPID YSFDDLNFQS FSSESYSTYP NIDQKISHNN  60
INGSCIEASL QVEDYFKRPM KQLKTNSWNP CITENIPPKA SSSSSSHIIS FDNSNSSPVI  120
SQQYYGTDCA VKPKNEVGWD GNMGYFPSSI FQSASKDQFC SPKFGQVSKR AGSLTRTPLH  180
AQEHVIAERK RREKLSQRFI SLSTLIPGLK KTDKASILGD AIKYLKQLQE RVTTLEEQVA  240
KKTVESVIFV RKTQIYADDE ISSCDENFDS QSNKPFPEIE AKVSDKDVLI RIHCEKNKGC  300
ISNIINEIEK LHLSVLNTNV LPFGQATLDI TIVAQMEAEF SMKVKDLVKS LRLALLKFM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	188	193	ERKRRE
2	189	194	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22760.1	1e-65	bHLH family protein