PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022751247.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 306aa MW: 33213.5 Da PI: 8.8184

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022751247.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	63.2	5e-20	16	61	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd+ll ++v+++G+++W++I++ ++ gR++k+c++rw + XP_022751247.1 16 KGPWSPEEDDLLQKLVQKHGPRNWSLISKSIP-GRSGKSCRLRWCNQ 61 79****************************.*********985 PP
2	Myb_DNA-binding	55.6	1.2e-17	70	112	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEde + +a++++G++ W+tIar ++ gRt++ +k++w++ XP_022751247.1 70 AFTPEEDETIMRAHARFGNK-WATIARLLN-GRTDNAIKNHWNST 112 79****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 306 aa Download sequence
MAVINTSNGK EMDRIKGPWS PEEDDLLQKL VQKHGPRNWS LISKSIPGRS GKSCRLRWCN 60 QLSPQVEHRA FTPEEDETIM RAHARFGNKW ATIARLLNGR TDNAIKNHWN STLKRKCLSV 120 GEECNFITNG GYDGNLGGEE RQPLKRSVSA GLYMSPGSPS GSDGSNSSVP VLSSSQVYKP 180 IPRTGGVNVD VNVMPAGVEA AASSSNDPPT SLSLSLPGAE SCEVSTHPAT ESSQMRSEAK 240 IEERGGGVMA FSKEFMAVMQ EMIRVEVRNY MVQMQQRNGG VSGRGGGMGM CLDGGFRNFM 300 AMNRVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	6e-99	MYB family protein