PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022751612.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 238aa MW: 27689.1 Da PI: 5.4197

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022751612.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.6	3.9e-15	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W ++Ed++l+ +++++G +W+ +++ g+ R++k+c++rw +yl XP_022751612.1 16 KGTWNPDEDQKLIAYITRYGIWNWNEMPKYAGLSRSGKSCRLRWMNYL 63 799***************99**********************97 PP
2	Myb_DNA-binding	55	1.8e-17	69	112	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T eE+e++v++ k+lG++ W+ Ia++++ Rt++++k++w++ XP_022751612.1 69 RGNFTREEEEIIVQLQKKLGNR-WSEIAARLP-QRTDNDIKNYWNT 112 89******************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 238 aa Download sequence
MTKATSLSKN KTFLKKGTWN PDEDQKLIAY ITRYGIWNWN EMPKYAGLSR SGKSCRLRWM 60 NYLRPNIKRG NFTREEEEII VQLQKKLGNR WSEIAARLPQ RTDNDIKNYW NTRLKKTVEK 120 NNISASGNTS PAEINSGIEA KQENSSHAEF SMFLNTLLDS PVPTLDDFPE PATPYSYTTN 180 DNFVSSDFLE QPLMTVVTLY DQDCQAMSPN SQLWLHEPIF ECDSYYDPLD NFWLNPFI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79180.1	6e-51	MYB family protein