PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022751680.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family YABBY
Protein Properties Length: 174aa    MW: 19519.9 Da    PI: 6.3353
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022751680.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY202.32e-6261594170
           YABBY   4 fssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvss 98 
                     + ++eq+Cy+ CnfCn +lavsvP +slf +vt+rCGhC+sl svn+a   q l+ ++          ++ + v++e +++   ++++ +++ s+
  XP_022751680.1   6 DVAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTIRCGHCSSLWSVNMAAVFQSLSGQDV---------QAPNYVTQEYYRTDLGSSSKCNNKLSM 91 
                     5689********************************************99999999884.........222222223232222222222222222 PP

           YABBY  99 eklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                         ++  +++++   v+rPPekrqrvPsayn+fikeeiqrik +nPdishreafs+aaknWahfP+ihfgl
  XP_022751680.1  92 ----RDPANDASEERVVNRPPEKRQRVPSAYNQFIKEEIQRIKGNNPDISHREAFSTAAKNWAHFPHIHFGL 159
                     ....23344455555699****************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MSSCIDVAPE QLCYIPCNFC NIVLAVSVPC SSLFDIVTIR CGHCSSLWSV NMAAVFQSLS  60
GQDVQAPNYV TQEYYRTDLG SSSKCNNKLS MRDPANDASE ERVVNRPPEK RQRVPSAYNQ  120
FIKEEIQRIK GNNPDISHRE AFSTAAKNWA HFPHIHFGLM LETNSQTKLD DASE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26580.17e-90YABBY family protein