PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022751693.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 543aa    MW: 60205 Da    PI: 5.0266
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022751693.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS417.21.4e-1271595241374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlsel..aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                     lv+ L++cAe+v+ gdl+la++l+  ++ l  + ++   + ++a +f  AL++r+++        + + + +  ++ e+   ++ f+e++P+lkf
  XP_022751693.1 159 LVHMLMTCAECVQRGDLSLASSLIDDMQMLltRVNTVCGIGKVAGHFIDALSHRIFQ-------GIGVGSINGGSVYENEILYHHFYEACPYLKF 246
                     689*************************99434444469*****************9.......23333344445788888999*********** PP

            GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrled 188
                     +h+taNqaIlea+eg+++vH++Df++++GlQWpaL+qaLa Rp+gpp lR+Tg+g+p+++ +++l+e+g rLa++A++++v+f f+ ++a+rled
  XP_022751693.1 247 AHFTANQAILEALEGHDCVHVVDFNLMHGLQWPALIQALALRPSGPPLLRLTGIGQPSPDGRDSLREIGLRLAELARSVNVRFTFRGVAASRLED 341
                     *********************************************************************************************** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +++++L+v+p+Ea+aVn+++qlhrll ++ + + ++++vL+ ++sl+Pk+++vveqea+hn++ +l+rf+eal+yys+lfdslea    + + ++
  XP_022751693.1 342 IKPWMLQVNPEEAVAVNSIMQLHRLLGSDSTRNCPIETVLSWIRSLNPKIMTVVEQEANHNQPGYLDRFTEALYYYSTLFDSLEAC---TVQPEK 433
                     **************************99999999*************************************************998...578888 PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      + + +++rei nvv+ceg++r+erhe l+kWr rl+ aGF++++l+++a kqa++ll  ++ +gy+vee++g+l lgW++rpL+++SaW+
  XP_022751693.1 434 ALAEIYIQREIANVVSCEGSARVERHEPLAKWRTRLSGAGFRALHLGSNAFKQASMLLTLFSAEGYSVEENEGCLSLGWHSRPLIAASAWQ 524
                     888999************************************************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 543 aa     Download sequence    
MELYDSATSA WSSSGSSSSS SSKPPPQHQQ DIDGLLAEAG YKIRSSDLRQ VAQRLERLEI  60
AMVNSPADFS QLASDAIYYN PSDLASWVDS LLSEFTQPAT CPSEFIMDPV TNQTVVNNVW  120
TTDEPHTPQV HQNISYEQQS LNHQLTVVTA MEENSGIRLV HMLMTCAECV QRGDLSLASS  180
LIDDMQMLLT RVNTVCGIGK VAGHFIDALS HRIFQGIGVG SINGGSVYEN EILYHHFYEA  240
CPYLKFAHFT ANQAILEALE GHDCVHVVDF NLMHGLQWPA LIQALALRPS GPPLLRLTGI  300
GQPSPDGRDS LREIGLRLAE LARSVNVRFT FRGVAASRLE DIKPWMLQVN PEEAVAVNSI  360
MQLHRLLGSD STRNCPIETV LSWIRSLNPK IMTVVEQEAN HNQPGYLDRF TEALYYYSTL  420
FDSLEACTVQ PEKALAEIYI QREIANVVSC EGSARVERHE PLAKWRTRLS GAGFRALHLG  480
SNAFKQASML LTLFSAEGYS VEENEGCLSL GWHSRPLIAA SAWQVMPDPA AEFLAWDNHQ  540
SFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.11e-159GRAS family protein