PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022751730.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB_related
Protein Properties Length: 257aa    MW: 28188.5 Da    PI: 10.3002
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022751730.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.47.8e-1499143347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + ++lG+g+W+ I+r + ++Rt+ q+ s+ qky
   XP_022751730.1  99 PWTEEEHRTFLLGLEKLGKGDWRGISRDFVTTRTPTQVASHAQKY 143
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MGRKCSHCGN TGHNSRTCNT YRATAVGGLR LFGVQLDMSS SSVSMKKSFS MDCLSSAPPS  60
SPSPSSSRVS IDENSDKTSI DYLSDGLMGR SPDRKKGVPW TEEEHRTFLL GLEKLGKGDW  120
RGISRDFVTT RTPTQVASHA QKYFLRQSTL NKKKRRSSLF DMVRGSSVAG SHVNSSNSQP  180
SHTIPQLGLH HHHHHAMPVN LEHGFSDFRT ETSNAAQSSN ISPNVAPDLE LTLATPRPLE  240
ENKSSSRTLL NRPISVT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1152156KKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.13e-59MYB_related family protein