PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022751744.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

NF-YA

Protein Properties

Length: 345aa MW: 38113.5 Da PI: 9.7945

Description

NF-YA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022751744.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CBFB_NFYA	96	4.3e-30	190	243	4	58
CBFB_NFYA 4 lYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +YVNaKQy++Il+RRq Rakl++++kl ksrkpylheSRh hAl+R RgsgGrF XP_022751744.1 190 IYVNAKQYHGILRRRQYRAKLKAQNKL-VKSRKPYLHESRHLHALNRVRGSGGRF 243 9************************.************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MAIRVQNMTK KNFDASSLHS LSRLSISGPP WWNSNEQQNI AQSLPQNISL KVESPSQLYH 60 NAKHLYLQLP VQGSASAQAI FGQSHHEVRV IGVTNSHCNS SESGQDEGCR KDTEGQRKQV 120 FLLNNPDTVF SPSHSNYNHS MASAPYPCAD AYFGGPFTTY GQEAIIQAQM AGSGATRIPL 180 PFDLAEDGFI YVNAKQYHGI LRRRQYRAKL KAQNKLVKSR KPYLHESRHL HALNRVRGSG 240 GRFLSKKKIQ QPDPTFNTSS QCISYASCLG QKNSRSELER RCPPAAEYTG SSISCSDMTS 300 VSNSDGNIQQ REHRFPDNSS RVGGHMQSSG GSMSNGILHC ASVVR

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MAIRVQNMTK KNFDASSLHS LSRLSISGPP WWNSNEQQNI AQSLPQNISL KVESPSQLYH  60
NAKHLYLQLP VQGSASAQAI FGQSHHEVRV IGVTNSHCNS SESGQDEGCR KDTEGQRKQV  120
FLLNNPDTVF SPSHSNYNHS MASAPYPCAD AYFGGPFTTY GQEAIIQAQM AGSGATRIPL  180
PFDLAEDGFI YVNAKQYHGI LRRRQYRAKL KAQNKLVKSR KPYLHESRHL HALNRVRGSG  240
GRFLSKKKIQ QPDPTFNTSS QCISYASCLG QKNSRSELER RCPPAAEYTG SSISCSDMTS  300
VSNSDGNIQQ REHRFPDNSS RVGGHMQSSG GSMSNGILHC ASVVR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17590.2	2e-38	NF-YA family protein