PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022751752.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

GRF

Protein Properties

Length: 435aa MW: 49766.8 Da PI: 8.4737

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022751752.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	76.9	2e-24	76	119	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+ep+rCrRtDGKkWRCs+++++++k+CErH+hrg++rsrk++e XP_022751752.1 76 DPEPRRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 119 79***************************************987 PP
2	QLQ	50.6	6e-18	8	42	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 +FT +Q+q+L++Q+l++ y++++ P+Pp+Ll+ ++ XP_022751752.1 8 PFTLSQWQELEHQALIFNYMVSGIPIPPDLLFTVK 42 8*****************************98776 PP

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence
MSERNIFPFT LSQWQELEHQ ALIFNYMVSG IPIPPDLLFT VKRSCLDSSL SSRLFSRQPQ 60 HIGWNCFRMG LGRKVDPEPR RCRRTDGKKW RCSKEAYPDS KYCERHMHRG KNRSRKPVEI 120 TTTTANPSTA TPPNISSITK SHAYSFSSLS STSLSSSESQ QHHHQLRYHG YHSQLDHPFM 180 YPYASRPPGI GLSPQENTTH SLMDSSSFSQ TNADYRRNSY VYGLKEEVDE HAFFSEPSGT 240 MRSFSGSSVD DSWQRTPLTM SSSSSKQRSC SGLQSDYSCL QLQSFTDHTS KQNKQDDEHC 300 YVLGSDIKCE MPIKLEKGEP QKIVHRFFDE WPPKQRDSWL DLDDKSSNSS SVSTTRLSIS 360 TPSTLHDFPI FSSRAHNGIL KKELNLIVIL LLLATRLSNF KTFNSFLFRS ENINFVLQMA 420 EYAVVDVCIR GQECT

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence

MSERNIFPFT LSQWQELEHQ ALIFNYMVSG IPIPPDLLFT VKRSCLDSSL SSRLFSRQPQ  60
HIGWNCFRMG LGRKVDPEPR RCRRTDGKKW RCSKEAYPDS KYCERHMHRG KNRSRKPVEI  120
TTTTANPSTA TPPNISSITK SHAYSFSSLS STSLSSSESQ QHHHQLRYHG YHSQLDHPFM  180
YPYASRPPGI GLSPQENTTH SLMDSSSFSQ TNADYRRNSY VYGLKEEVDE HAFFSEPSGT  240
MRSFSGSSVD DSWQRTPLTM SSSSSKQRSC SGLQSDYSCL QLQSFTDHTS KQNKQDDEHC  300
YVLGSDIKCE MPIKLEKGEP QKIVHRFFDE WPPKQRDSWL DLDDKSSNSS SVSTTRLSIS  360
TPSTLHDFPI FSSRAHNGIL KKELNLIVIL LLLATRLSNF KTFNSFLFRS ENINFVLQMA  420
EYAVVDVCIR GQECT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	2e-46	GRF family protein