PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022751778.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 199aa MW: 23151.3 Da PI: 9.5211

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022751778.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	64	3e-20	17	64	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd++l+++++ +G+++Wk++a++ g++R++k+c++rw +yl XP_022751778.1 17 RGAWTVEEDQKLAQVIEIHGPRRWKSVAAKAGLNRCGKSCRLRWMNYL 64 89********************************************97 PP
2	Myb_DNA-binding	48.9	1.5e-15	70	113	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ + +E++l+++++k+lG++ W++Ia +++ gRt++++k++w++ XP_022751778.1 70 RGNISDQEEDLILRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNS 113 78999***************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 199 aa Download sequence
MSMAPIGNKC TRKEVNRGAW TVEEDQKLAQ VIEIHGPRRW KSVAAKAGLN RCGKSCRLRW 60 MNYLRPNIKR GNISDQEEDL ILRLHKLLGN RWSLIAGRLP GRTDNEIKNY WNSRLSKKIK 120 QNEKQNRGSR MQESVIKNSK VSEVDLVAKE SEEGTSKRDD DPTSCFIGDT FFDFYSKEPF 180 SLEWMSQFLE MDESWCSFP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13540.1	3e-53	MYB family protein