PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022751796.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 464aa MW: 49051.4 Da PI: 6.1818

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022751796.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.9	6.5e-12	257	302	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq XP_022751796.1 257 HSIAERLRRERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 302 99*********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MQPCSREMQA MNSLLNQPYQ QIPLQDLQGN GHQQIQNSQL ETTSSHDDFL EQMLSTFPSS 60 SWSDIKSTWD PPKSDETGPY NPDNNVGFHY DEILASKLRQ HQINGGGVCS PATAVMKMMQ 120 QQTMLEGNTA AAACGGGGGG GGLTLPFSLG PDDAGSHQND IVDGSLFKPP NHQGGDGSVQ 180 AFYNGFGAGS LRGTNLPSNQ PQHFHHPQGE TILAQNIGAT AGTAMNQSQA SGSTTGCTPA 240 QPKQRVRARR GQATDPHSIA ERLRRERIAE RMKALQELVP NANKTDKASM LDEIIDYVKF 300 LQLQVKVLSM SRLGGAAVAS HVASMPSEGG DCSIQTSGDG GSLPRNSNGN TPSSTDDGLT 360 VTEHQVAKLM EQDMGSAMQY LQGKGLCLMP ISLVTAISTT TCHSRNPMIN NVNQNTTSSN 420 YRSLQSSGEG SSSPSMSLLT VQSATMGNGG VDASVKDAAS VSKP

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MQPCSREMQA MNSLLNQPYQ QIPLQDLQGN GHQQIQNSQL ETTSSHDDFL EQMLSTFPSS  60
SWSDIKSTWD PPKSDETGPY NPDNNVGFHY DEILASKLRQ HQINGGGVCS PATAVMKMMQ  120
QQTMLEGNTA AAACGGGGGG GGLTLPFSLG PDDAGSHQND IVDGSLFKPP NHQGGDGSVQ  180
AFYNGFGAGS LRGTNLPSNQ PQHFHHPQGE TILAQNIGAT AGTAMNQSQA SGSTTGCTPA  240
QPKQRVRARR GQATDPHSIA ERLRRERIAE RMKALQELVP NANKTDKASM LDEIIDYVKF  300
LQLQVKVLSM SRLGGAAVAS HVASMPSEGG DCSIQTSGDG GSLPRNSNGN TPSSTDDGLT  360
VTEHQVAKLM EQDMGSAMQY LQGKGLCLMP ISLVTAISTT TCHSRNPMIN NVNQNTTSSN  420
YRSLQSSGEG SSSPSMSLLT VQSATMGNGG VDASVKDAAS VSKP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	262	267	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	6e-71	bHLH family protein