PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022751878.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family LBD
Protein Properties Length: 181aa    MW: 20034.4 Da    PI: 7.8528
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022751878.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260143.47e-4518116199
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+lrrkC +dC++apyfp e+p+kfanvhk+FGasnv+kll+++p+++reda++sl+yeAear++dPvyG+vg i+ lq+q+++l+ el+
  XP_022751878.1  18 PCAACKFLRRKCMPDCIYAPYFPPEEPQKFANVHKIFGASNVSKLLNEIPPHQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVMRLQRELD 112
                     7*********************************************************************************************9 PP

          DUF260  96 llke 99 
                     ++++
  XP_022751878.1 113 ATNA 116
                     9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MQFFGAEKMA SSSYSNSPCA ACKFLRRKCM PDCIYAPYFP PEEPQKFANV HKIFGASNVS  60
KLLNEIPPHQ REDAVNSLAY EAEARMKDPV YGCVGAISVL QRQVMRLQRE LDATNADLIR  120
YARNEMPETA AISQYGRRTA AGHGSTGGSN FLNQNSGFYY PSQWNNNDPG GDNERSGSGS  180
M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G27650.13e-71LBD family protein