PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022751935.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 398aa MW: 43348.2 Da PI: 6.6522

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022751935.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.5	2.7e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ ++ ++G g+W++ +++ g+ R++k+c++rw +yl XP_022751935.1 14 KGPWTPEEDQKLLAYIDEHGHGSWRALPAKAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	53.9	4.1e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++++++++++lG++ W++Ia +++ +Rt++++k++w+++l XP_022751935.1 67 RGKFSLQEEQIIIQLHALLGNR-WSAIATHLP-KRTDNEIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MGRSPCCDKV GLKKGPWTPE EDQKLLAYID EHGHGSWRAL PAKAGLQRCG KSCRLRWTNY 60 LRPDIKRGKF SLQEEQIIIQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLAKMG 120 IDPITHKPKS DALLSTDGQS KHAANLSHMA QWESARLEAE ARLARESKLR SHSLQHQLGP 180 PGFAPSGSAS TSAAQLVNKT AWNSTTGWTK SSEGNSAVLN TGLGGAANLE SPTSTLTFSE 240 NARPIMSKGL GVSSMPVIEF VGTTSGSSEA GIIKEEGEQE WKGLGSSTNL PDYKEGIENS 300 LSFTSSLHDM TISMEGGWTP ESLRPNSSHI DVANVMEEGF TNLLLNDSTD KSLSDSGKES 360 DENSGGSGDG SDYYEDNKNY WNSILNLVNS SPSDSPMF

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MGRSPCCDKV GLKKGPWTPE EDQKLLAYID EHGHGSWRAL PAKAGLQRCG KSCRLRWTNY  60
LRPDIKRGKF SLQEEQIIIQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLAKMG  120
IDPITHKPKS DALLSTDGQS KHAANLSHMA QWESARLEAE ARLARESKLR SHSLQHQLGP  180
PGFAPSGSAS TSAAQLVNKT AWNSTTGWTK SSEGNSAVLN TGLGGAANLE SPTSTLTFSE  240
NARPIMSKGL GVSSMPVIEF VGTTSGSSEA GIIKEEGEQE WKGLGSSTNL PDYKEGIENS  300
LSFTSSLHDM TISMEGGWTP ESLRPNSSHI DVANVMEEGF TNLLLNDSTD KSLSDSGKES  360
DENSGGSGDG SDYYEDNKNY WNSILNLVNS SPSDSPMF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.1	1e-110	MYB family protein