PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022751945.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

TCP

Protein Properties

Length: 370aa MW: 41152.7 Da PI: 8.2786

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022751945.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	106.6	3.9e-33	48	179	2	124
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaksaa. 95 g+kdrhsk++T +g+RdRRvRls+++a++++dLqd+LG+ ++sk ++WLl++ak++i+el+ ++ ++ ++ +++ + s+s++ +++++++ XP_022751945.1 48 FGGKDRHSKVCTIRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAKHEIDELPPLPVPPGYFSLNHQMVLSTSQEARASQSNKEGl 142 689*************************************************************9999988866676666665555544433333 PP TCP 96 kskksqksaasalnlakesr........akararare 124 k++ s + + a l+++s ak++ + e XP_022751945.1 143 KTSTSVNWEDPAGGLSRSSFwssdafwrAKSKDVSWE 179 4444444444333333333233333333333333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MIASSKEADF PTKQEGNIND TEVSKGPSSS LPWLRLKDQR IVRVSRAFGG KDRHSKVCTI 60 RGLRDRRVRL SVPTAIQLYD LQDRLGLNQP SKVVDWLLNA AKHEIDELPP LPVPPGYFSL 120 NHQMVLSTSQ EARASQSNKE GLKTSTSVNW EDPAGGLSRS SFWSSDAFWR AKSKDVSWET 180 TTNEKDNWNK RNEQEKQEAS EGHHGAQVPS DNILQRANRS SLPALLNNAE PYGSYYHFDP 240 SNFPLSQLGS HGFASHTEER HNFNVVPLPS TLSLSSGSQI LVCPPGATQP FFPPQTTASL 300 EIDPRQQVNH FQMLSSGAQS LLPNSLNPPA AAYSISQSIR PFHLSMIPRL HNSHNSSGNQ 360 QDKEQDFPSK

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MIASSKEADF PTKQEGNIND TEVSKGPSSS LPWLRLKDQR IVRVSRAFGG KDRHSKVCTI  60
RGLRDRRVRL SVPTAIQLYD LQDRLGLNQP SKVVDWLLNA AKHEIDELPP LPVPPGYFSL  120
NHQMVLSTSQ EARASQSNKE GLKTSTSVNW EDPAGGLSRS SFWSSDAFWR AKSKDVSWET  180
TTNEKDNWNK RNEQEKQEAS EGHHGAQVPS DNILQRANRS SLPALLNNAE PYGSYYHFDP  240
SNFPLSQLGS HGFASHTEER HNFNVVPLPS TLSLSSGSQI LVCPPGATQP FFPPQTTASL  300
EIDPRQQVNH FQMLSSGAQS LLPNSLNPPA AAYSISQSIR PFHLSMIPRL HNSHNSSGNQ  360
QDKEQDFPSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02150.2	2e-48	TCP family protein