PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022752034.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HD-ZIP

Protein Properties

Length: 328aa MW: 36622.4 Da PI: 4.6156

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022752034.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.7	4.6e-19	57	110	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ +q+++Le+ Fe ++++ e++ +LA++lgL+ rqV vWFqNrRa++k XP_022752034.1 57 KKRRLSVDQVKALEKNFEVENKLEPERKMKLAQELGLQPRQVAVWFQNRRARWK 110 566899***********************************************9 PP
2	HD-ZIP_I/II	129.5	1.3e-41	56	148	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrls +qvk+LE++Fe e+kLeperK++la+eLglqprqvavWFqnrRAR+ktkqlE+dy Lk++y++lk + ++L++++e+L +e++e XP_022752034.1 56 EKKRRLSVDQVKALEKNFEVENKLEPERKMKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGLLKSSYETLKVNYDTLQHDNEALLKEISE 148 69*************************************************************************************999976 PP

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence
MKRLGSSDSL GALMSICPTT DEHSPRNNHI YSREFQSMLD GLDEEGCVEE SGHVAEKKRR 60 LSVDQVKALE KNFEVENKLE PERKMKLAQE LGLQPRQVAV WFQNRRARWK TKQLERDYGL 120 LKSSYETLKV NYDTLQHDNE ALLKEISELK AKLNGESTKS NLSVKQEVIV PESNDTKALE 180 QSEPPPVSSL ATPSEPAELN YESFNNSNGS VGATLIADLK DGSSDSDSSA ILNEDNNNSP 240 NNAAVSSSGV LPSQHLLMSP TTTSSLNFNS SSSPTSSMNC FQLPKTTYQP LQYVKIEEHN 300 FFSTDEACNF FSDEQAPSLP WYCPDQWN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	57	86	KKRRLSVDQVKALEKNFEVENKLEPERKMK
2	105	113	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G40060.1	2e-74	HD-ZIP family protein