PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022752055.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 349aa MW: 38914.9 Da PI: 8.7273

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022752055.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.5	4.3e-12	172	218	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h +Er+RR+++ ++f L ++P + kK++Ka++L A++Y+k+Lq XP_022752055.1 172 DHILAERKRREKLSQRFIALSAIVPGL-----KKMDKASVLGDAIKYVKQLQ 218 5899*********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MDEYNIIHQC HMKSLAELAT ADDIATALAS GNFKQSFSSE RYSSYPNFTS KNTTTFSGSS 60 IETYDQRTSK KLKTSSSWNS STTTEHVPQK PSSPTSQILS FEKPTSMPAN SRQFYNIDNT 120 VKPKDEIVSS GNMNFSPVIT NGPFETTNYA PKTNQGIQRT YSMTRSPSHA QDHILAERKR 180 REKLSQRFIA LSAIVPGLKK MDKASVLGDA IKYVKQLQER LKVLEEQTKK RTVESVVFVK 240 KSWLSTDDES SSCEGNSDGQ SSDAALPEIE VRVSDNDVLI RIHCEKQKGF VAKILSEIEN 300 LNLSVVNSSV LPFGNSTLDI TIIAQKDAEF NVTVKDLVKD LRVALLKFM

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MDEYNIIHQC HMKSLAELAT ADDIATALAS GNFKQSFSSE RYSSYPNFTS KNTTTFSGSS  60
IETYDQRTSK KLKTSSSWNS STTTEHVPQK PSSPTSQILS FEKPTSMPAN SRQFYNIDNT  120
VKPKDEIVSS GNMNFSPVIT NGPFETTNYA PKTNQGIQRT YSMTRSPSHA QDHILAERKR  180
REKLSQRFIA LSAIVPGLKK MDKASVLGDA IKYVKQLQER LKVLEEQTKK RTVESVVFVK  240
KSWLSTDDES SSCEGNSDGQ SSDAALPEIE VRVSDNDVLI RIHCEKQKGF VAKILSEIEN  300
LNLSVVNSSV LPFGNSTLDI TIIAQKDAEF NVTVKDLVKD LRVALLKFM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	177	182	ERKRRE
2	178	183	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	3e-69	bHLH family protein