PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022752057.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HD-ZIP

Protein Properties

Length: 285aa MW: 31936.1 Da PI: 8.2114

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022752057.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56.2	5.7e-18	141	195	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +k+ ++tkeq Le+ F+ ++p+ +++ LA++l+L rqV vWFqNrRa+ k XP_022752057.1 141 KKKLRLTKEQSALLEDSFKHRNTPNPKQKLALARQLNLRPRQVEVWFQNRRARTK 195 678899***********************************************98 PP
2	HD-ZIP_I/II	116.2	1.9e-37	141	229	1	90
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 +kk+rl+keq++lLE+sF+++++ +p++K +lar+L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk+ +++lk+en+rL+ke +e r + XP_022752057.1 141 KKKLRLTKEQSALLEDSFKHRNTPNPKQKLALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKYCETLKDENKRLQKELQEFR-A 229 59***********************************************************************************998.4 PP

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence
MDLDDACNTS LVLGLGFSST LEIPSKANNY QTPKKSSCLK FEQTTMAATS FEPLLTLGLS 60 DDSYHVTAAS KKIDVNKGGY QHHHEEPATC DFLNLQASHS AVSSFSSGMV KRERDLSSEE 120 LEVEKNSSTV SGEDEDGVNA KKKLRLTKEQ SALLEDSFKH RNTPNPKQKL ALARQLNLRP 180 RQVEVWFQNR RARTKLKQTE VDCEFLKKYC ETLKDENKRL QKELQEFRAL KMGQLFYMHM 240 PAATLTLCPS CEKIGGVGDG NSKNPFSMAS KPHFYNPFTN PSAAC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	190	198	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37790.1	9e-92	HD-ZIP family protein