PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022752069.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

LBD

Protein Properties

Length: 230aa MW: 25175.7 Da PI: 8.0934

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022752069.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	100.6	1.5e-31	2	103	1	97
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 +C++C+vlr++C+++C+l+p++ p++q +++ +v+k+FG++ ++ +++a+pe++r+++++sl++eA+ r+ +Pv+Gavg++++++++++q+ XP_022752069.1 2 SCNGCRVLRKGCSESCILRPCLqwiesPEAQGHATVFVAKFFGRAGLMAFISAVPESQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQA 96 6********************************************************************************************** PP DUF260 91 kaelall 97 ++e++l+ XP_022752069.1 97 AVETVLR 103 *999876 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MSCNGCRVLR KGCSESCILR PCLQWIESPE AQGHATVFVA KFFGRAGLMA FISAVPESQR 60 PALFQSLLFE ACGRTVNPVN GAVGLLWTGN WHVCQAAVET VLRGGTLRAM PELMAPTPAS 120 DEASEATCTD MWKLQETSTN LNSNRRFSNS RSKVSPKRKR IEEFNKLQPS DLDLCLTPSF 180 TGKQVPDNRR PGTPSMNSEE SVMTTCSESG FADHQGQGEG ADKKLLKLFI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	222	228	DKKLLKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G67420.1	2e-88	LBD family protein