PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022752098.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MIKC_MADS
Protein Properties Length: 226aa    MW: 26168.9 Da    PI: 10.0512
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022752098.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF91.44.4e-29959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    k ien++nrqvt+skRrng++KKA+EL vLCda+v++i+fsstgkl+e++s
  XP_022752098.1  9 KLIENSTNRQVTYSKRRNGLFKKANELTVLCDARVSIIMFSSTGKLHEFIS 59
                    569**********************************************86 PP
2K-box89.37.2e-3071169199
           K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 
                     yq++ g + ++++ e++q++l+ Lk+ ++nL++++R+++G++L++Ls+k+L+ Leq++e+s k +R++K++++ +qie+ +kk+++ + ++k+L 
  XP_022752098.1  71 YQRTLGIDIWNTHFEKMQEQLKHLKEVNRNLRKQIRQRMGDCLNDLSIKDLRGLEQEMESSAKLVRERKYRVFSNQIETFRKKMRNEEGIHKNLL 165
                     677778899*************************************************************************************9 PP

           K-box  96 kkle 99 
                     ++l+
  XP_022752098.1 166 HELD 169
                     9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MARGKIQIKL IENSTNRQVT YSKRRNGLFK KANELTVLCD ARVSIIMFSS TGKLHEFISP  60
STSTKQIIDQ YQRTLGIDIW NTHFEKMQEQ LKHLKEVNRN LRKQIRQRMG DCLNDLSIKD  120
LRGLEQEMES SAKLVRERKY RVFSNQIETF RKKMRNEEGI HKNLLHELDA IKEDPYGLVD  180
NGGDYDTLIG YQNRGPRVFA LSLQPNHPNL HSAGGGSDLT TYPLLH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54340.11e-101MIKC_MADS family protein