PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022752125.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 547aa    MW: 61775.3 Da    PI: 6.2378
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022752125.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS310.63.5e-951895452374
            GRAS   2 velLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     +e L+++A+ +++++l+laq +Larl+++ +sp+g+p+qR+a+yf+eAL++ l++      ++ ++s +s+++ +++++a+k+fs + Pi+ f+h
  XP_022752125.1 189 IEELIRAADYFDTHELQLAQVILARLNQRlRSPSGKPLQRAAFYFKEALQSLLTG------STRSTSLSSWSQIVQTIKAYKAFSGINPIPMFTH 277
                     678*************************99*************************......6677778888889********************* PP

            GRAS  96 ltaNqaIleavege.ervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrled 188
                     +t+Nqa+lea++g+   +HiiDfdi+ G Q+++L++++++R+ ++   +R+T+v+++e   + e++ ++++L +fA+ l+++f++++++ +++e+
  XP_022752125.1 278 FTTNQALLEALDGSaPLIHIIDFDIGLGSQYASLMREISERDdHSCKFIRVTAVVPEE--YAIETRLINDNLFQFAQDLKLRFQIEFVLLRTFEM 370
                     **************7889************************555669********66..99999****************************** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe..adhnsesFlerflealeyysalfdsleaklpresee 281
                     l+++++++ +gE++a+ l+ +++r l  s+++    +++L+ +++++P vvv+v++e  ++ +++sF + f+++le+y+++f+sl+a + +  e+
  XP_022752125.1 371 LSFKAFNFMEGEKMAILLSPSIFRCL--SLNV----TAFLSDLRRINPSVVVFVDSEvwMESGATSFRKSFVNSLEFYTMMFESLDAAV-AGREW 458
                     *************************9..4444....56*******************66677999********************9997.77899 PP

            GRAS 282 rikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      +k+E  ll+++i  +v  + ++      t+  Wre +  aG+++v+ls++a  qa++ll k++++g++v +++++lvl+W++ +Lv++SaW+
  XP_022752125.1 459 VRKIETLLLQPRILAAVEVAARR------TAPPWREVFYGAGMRAVHLSQFADFQAECLLGKMPVQGFQVAKRQAQLVLCWRKSALVATSAWK 545
                     99***************999887......89*************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 547 aa     Download sequence    
MRVPVTAPQN NHSLTPEANN NDNSTTRARN ISFVNSVSAS CYEPTSVLDL RRNPSPAVPE  60
KPVSNPVDVS NCISVSNPPP HHHHQAPLEW EEHVLRNMDW DSIMKDLGLD DESVPAIKTI  120
PPQAISPSSE NHIQNLPVFT PCELTQHSIH SDLDNLYDFY SGLNNNYLDS SNSCNFHNSG  180
NFNLGFDFIE ELIRAADYFD THELQLAQVI LARLNQRLRS PSGKPLQRAA FYFKEALQSL  240
LTGSTRSTSL SSWSQIVQTI KAYKAFSGIN PIPMFTHFTT NQALLEALDG SAPLIHIIDF  300
DIGLGSQYAS LMREISERDD HSCKFIRVTA VVPEEYAIET RLINDNLFQF AQDLKLRFQI  360
EFVLLRTFEM LSFKAFNFME GEKMAILLSP SIFRCLSLNV TAFLSDLRRI NPSVVVFVDS  420
EVWMESGATS FRKSFVNSLE FYTMMFESLD AAVAGREWVR KIETLLLQPR ILAAVEVAAR  480
RTAPPWREVF YGAGMRAVHL SQFADFQAEC LLGKMPVQGF QVAKRQAQLV LCWRKSALVA  540
TSAWKWI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36710.11e-160GRAS family protein