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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | XP_022752125.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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| Family | GRAS | ||||||||
| Protein Properties | Length: 547aa MW: 61775.3 Da PI: 6.2378 | ||||||||
| Description | GRAS family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | GRAS | 310.6 | 3.5e-95 | 189 | 545 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95
+e L+++A+ +++++l+laq +Larl+++ +sp+g+p+qR+a+yf+eAL++ l++ ++ ++s +s+++ +++++a+k+fs + Pi+ f+h
XP_022752125.1 189 IEELIRAADYFDTHELQLAQVILARLNQRlRSPSGKPLQRAAFYFKEALQSLLTG------STRSTSLSSWSQIVQTIKAYKAFSGINPIPMFTH 277
678*************************99*************************......6677778888889********************* PP
GRAS 96 ltaNqaIleavege.ervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrled 188
+t+Nqa+lea++g+ +HiiDfdi+ G Q+++L++++++R+ ++ +R+T+v+++e + e++ ++++L +fA+ l+++f++++++ +++e+
XP_022752125.1 278 FTTNQALLEALDGSaPLIHIIDFDIGLGSQYASLMREISERDdHSCKFIRVTAVVPEE--YAIETRLINDNLFQFAQDLKLRFQIEFVLLRTFEM 370
**************7889************************555669********66..99999****************************** PP
GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe..adhnsesFlerflealeyysalfdsleaklpresee 281
l+++++++ +gE++a+ l+ +++r l s+++ +++L+ +++++P vvv+v++e ++ +++sF + f+++le+y+++f+sl+a + + e+
XP_022752125.1 371 LSFKAFNFMEGEKMAILLSPSIFRCL--SLNV----TAFLSDLRRINPSVVVFVDSEvwMESGATSFRKSFVNSLEFYTMMFESLDAAV-AGREW 458
*************************9..4444....56*******************66677999********************9997.77899 PP
GRAS 282 rikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
+k+E ll+++i +v + ++ t+ Wre + aG+++v+ls++a qa++ll k++++g++v +++++lvl+W++ +Lv++SaW+
XP_022752125.1 459 VRKIETLLLQPRILAAVEVAARR------TAPPWREVFYGAGMRAVHLSQFADFQAECLLGKMPVQGFQVAKRQAQLVLCWRKSALVATSAWK 545
99***************999887......89*************************************************************8 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 547 aa Download sequence |
MRVPVTAPQN NHSLTPEANN NDNSTTRARN ISFVNSVSAS CYEPTSVLDL RRNPSPAVPE 60 KPVSNPVDVS NCISVSNPPP HHHHQAPLEW EEHVLRNMDW DSIMKDLGLD DESVPAIKTI 120 PPQAISPSSE NHIQNLPVFT PCELTQHSIH SDLDNLYDFY SGLNNNYLDS SNSCNFHNSG 180 NFNLGFDFIE ELIRAADYFD THELQLAQVI LARLNQRLRS PSGKPLQRAA FYFKEALQSL 240 LTGSTRSTSL SSWSQIVQTI KAYKAFSGIN PIPMFTHFTT NQALLEALDG SAPLIHIIDF 300 DIGLGSQYAS LMREISERDD HSCKFIRVTA VVPEEYAIET RLINDNLFQF AQDLKLRFQI 360 EFVLLRTFEM LSFKAFNFME GEKMAILLSP SIFRCLSLNV TAFLSDLRRI NPSVVVFVDS 420 EVWMESGATS FRKSFVNSLE FYTMMFESLD AAVAGREWVR KIETLLLQPR ILAAVEVAAR 480 RTAPPWREVF YGAGMRAVHL SQFADFQAEC LLGKMPVQGF QVAKRQAQLV LCWRKSALVA 540 TSAWKWI |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT4G36710.1 | 1e-160 | GRAS family protein | ||||




