PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022752139.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GATA
Protein Properties Length: 250aa    MW: 27860.6 Da    PI: 7.8596
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022752139.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA63.62.3e-20132166135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C+nC tt+TplWR+gp+g+k+LCnaCG++++k+++
  XP_022752139.1 132 CANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 166
                     ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MMHRCSSSPG NMVGQCSCGQ FHSQSNSFSM LFSMPNHNSY DETNMYPFTS SSSSSVDCTL  60
SLGTPSTRLC EDDDKRILHD SRSGNSCMSN FCWDLLQNKN THYSQQTQKA SRGSNGNSSS  120
SSGNDPLLAR RCANCDTTST PLWRNGPRGP KSLCNACGIR FKKEERRAAA ANSNKSGATA  180
SMLEQQNHGY HDNNSWVHHS QNQKMPCFPP VSEFRFIEDS DRDSDTGIPF LSWRLNVTDR  240
PTSLVHDFTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50870.16e-59GATA family protein