PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022752215.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GATA
Protein Properties Length: 271aa    MW: 30259.8 Da    PI: 8.1752
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022752215.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.76.9e-18160194135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C +C t kTp+WR gp g+ktLCnaCG++y++ +l
  XP_022752215.1 160 CLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRL 194
                     99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MQFGENCYED LAELEWLSNF VEESFSSEDL QKPQLISGTK TRPDESSEAP GFQPALPNQI  60
DNAIDNGDKH GNNNNNSIFH PDMSVPAKAR SKRSRAAPCN WASRLLVLSP TTSSSEPEIL  120
VPVQPPPQNH PGKKPVKTTS SKKKDVGDGG GVANPDGRKC LHCATDKTPQ WRTGPMGPKT  180
LCNACGVRYK SGRLVPEYRP AASPTFVLTK HSNSHRKVLE LRRQKEVVRA QQQHQQQFIH  240
HHHHEDMVFD VSNGDDYLIH QHVGPDFRQL I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.12e-75GATA family protein