PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022752240.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 439aa MW: 50066.1 Da PI: 7.8745

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022752240.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.9	2.4e-18	222	268	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT++Ed llv++vk++G++ W+ Ia +++ gR +kqc++rw+++l XP_022752240.1 222 KGQWTPQEDRLLVQLVKRHGTKKWSQIAMMLN-GRVGKQCRERWHNHL 268 799***************************.***********97 PP
2	Myb_DNA-binding	54.2	3.4e-17	274	316	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++W+++Ed +l++a+k+ G++ W+ Iar+++ gRt++ +k++w+ XP_022752240.1 274 KDSWSEDEDRILIQAHKEIGNK-WAEIARRLP-GRTENTIKNHWN 316 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 439 aa Download sequence
MEFDTSFRDD FPLLSSLLSN NNSSSFKPDF GNGFFPLVDG SSSSKGLLEN FILHDQNHHL 60 TPNVNNASFL NPHHFHQFFI DGSSKNPFLG VSSTCTNPFE PFANGFSNDL NAYIPSLPFA 120 PESSTVKDGL FQGFQTEGCW DFSQNKAPAQ PLTEIDQIYH HQPLNFQDQQ PPVTAKLADE 180 VSCVTADQNN GLQDKVDQKK NKRFFQSRRS GSKALKKTNI IKGQWTPQED RLLVQLVKRH 240 GTKKWSQIAM MLNGRVGKQC RERWHNHLRP DIKKDSWSED EDRILIQAHK EIGNKWAEIA 300 RRLPGRTENT IKNHWNATKR RQYSRRKGKD SNPKGSLLQN YIKSVSPTST RKYKGKRVLL 360 ETNPETSDFN PTDWQVVVPN VFCDHQSCTA SFGSMLEEVN PCSSVVEEES NAMEIEIPLE 420 MNYMKKELDL LEMISQGNL

Sequence ? help Back to Top

Protein Sequence Length: 439 aa Download sequence

MEFDTSFRDD FPLLSSLLSN NNSSSFKPDF GNGFFPLVDG SSSSKGLLEN FILHDQNHHL  60
TPNVNNASFL NPHHFHQFFI DGSSKNPFLG VSSTCTNPFE PFANGFSNDL NAYIPSLPFA  120
PESSTVKDGL FQGFQTEGCW DFSQNKAPAQ PLTEIDQIYH HQPLNFQDQQ PPVTAKLADE  180
VSCVTADQNN GLQDKVDQKK NKRFFQSRRS GSKALKKTNI IKGQWTPQED RLLVQLVKRH  240
GTKKWSQIAM MLNGRVGKQC RERWHNHLRP DIKKDSWSED EDRILIQAHK EIGNKWAEIA  300
RRLPGRTENT IKNHWNATKR RQYSRRKGKD SNPKGSLLQN YIKSVSPTST RKYKGKRVLL  360
ETNPETSDFN PTDWQVVVPN VFCDHQSCTA SFGSMLEEVN PCSSVVEEES NAMEIEIPLE  420
MNYMKKELDL LEMISQGNL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27785.1	9e-77	MYB family protein