PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022752255.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 296aa MW: 33329.2 Da PI: 9.3652

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022752255.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.2	6.8e-17	17	62	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ede+l+++v+q+G+++W+ Ia+++ gR++k c++rw++ XP_022752255.1 17 RGHWRPAEDEQLLQLVAQFGPKNWNIIAQHLE-GRSGKGCRLRWYNQ 62 899***************************.**********96 PP
2	Myb_DNA-binding	43.5	7.4e-14	69	112	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++++T+e++e l+ ++ G++ W++Iar ++ gRt++ +k++++ XP_022752255.1 69 KKPFTEEDEEMLLTNHRIQGNK-WASIARLFP-GRTDNAVKNHYHV 112 689*****************.*****.*********86 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MGNFRRNRCD SEKSCHRGHW RPAEDEQLLQ LVAQFGPKNW NIIAQHLEGR SGKGCRLRWY 60 NQLDPNINKK PFTEEDEEML LTNHRIQGNK WASIARLFPG RTDNAVKNHY HVIMARRKRE 120 KLLSYCNRTD QKGNPDHSNI NISGKFERFL IRPQPKCEDS KLGRVCRFQV TDRQGFTLLS 180 SSSSSQPSSL SGCGSTISND SSGYARASNQ NQFANKECDS CIGSPKAVHL QHSFRFSNFA 240 NGFGSEGENS RGGLVEFNDN PSALWNLHIV SGENQGVGSM KHKDVSLIDF LGVGIS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	116	121	RRKREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33450.1	2e-65	MYB family protein