PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022752293.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 356aa MW: 39504.4 Da PI: 6.7638

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022752293.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.6	1.6e-14	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+ ++ G+g +W + ++++g++R++k+c++rw++yl XP_022752293.1 14 KGPWSPEEDAKLKAHIEANGTGgNWIALPKKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	37.5	5.5e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ XP_022752293.1 69 GGFSEEEDNIICSLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDAKLKAHIE ANGTGGNWIA LPKKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEDNIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLVGK 120 QRKEQQARRA SCLTLKEEMK RESENYVIPG MVSQPPYWPQ LPAVMPLTST SQDSHLKEQE 180 SLRNLLIKLG GRFSDDHPQS SANTTSNNPM NFGYPLGVSF VQDQLYENSM NMLSFLSASS 240 ISPINSTCSQ VTNSTHFNVN EAAGPNDMFQ GIDGFPAELS ELIYSNNKQI LDGLEGFYGT 300 DNMVDGSSTG TSSVESSSWG DINSLCYPQI VSAFEACQQS MPQVSTFDES TYFGPH

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MGRAPCCDKA NVKKGPWSPE EDAKLKAHIE ANGTGGNWIA LPKKIGLKRC GKSCRLRWLN  60
YLRPNIKHGG FSEEEDNIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLVGK  120
QRKEQQARRA SCLTLKEEMK RESENYVIPG MVSQPPYWPQ LPAVMPLTST SQDSHLKEQE  180
SLRNLLIKLG GRFSDDHPQS SANTTSNNPM NFGYPLGVSF VQDQLYENSM NMLSFLSASS  240
ISPINSTCSQ VTNSTHFNVN EAAGPNDMFQ GIDGFPAELS ELIYSNNKQI LDGLEGFYGT  300
DNMVDGSSTG TSSVESSSWG DINSLCYPQI VSAFEACQQS MPQVSTFDES TYFGPH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	5e-87	MYB family protein