PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022752352.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family NF-YA
Protein Properties Length: 317aa    MW: 34304.9 Da    PI: 9.4976
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022752352.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA98.66.3e-31171226158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep+YVNaKQyq+Il+RRq+Rak+e  kk+  k+rkpylheSRh+hA+rR+RgsgGrF
  XP_022752352.1 171 QEPVYVNAKQYQGILRRRQARAKAEL-KKV-VKARKPYLHESRHQHAMRRARGSGGRF 226
                     69***********************9.777.8*************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MQSKSEGGNR SEPDSRGVPP TAVYCKPWGR NIGYGAISLG VRGGNASNSS SMECPNGLEN  60
GQSLSNDELN EEDDGNKETQ ATASSRSVGN GGQEHHSLQL VASSMSAMRD ECLTQPPQLE  120
LVGHSIACVS NPYQDPFYGR MMAAYGHQPL NYPSFVGMPH PRMALPIEME QEPVYVNAKQ  180
YQGILRRRQA RAKAELKKVV KARKPYLHES RHQHAMRRAR GSGGRFAKKT DADTTKPMAE  240
EKGTGSGPAL SSQSASSSGS EPLPSDSAET RNSSLTQQEA RGSRVHNRPQ VNGSSQFQKR  300
GDSISSNQAS HRPLAIQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.13e-79NF-YA family protein