PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022752436.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 488aa MW: 54407.2 Da PI: 5.4872

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022752436.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.7	1.1e-17	28	75	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed +lvd+vk++G g+W+++ + g+ R++k+c++rw ++l XP_022752436.1 28 KGPWTSAEDAILVDYVKKHGEGNWNAVQKNSGLSRCGKSCRLRWANHL 75 79******************************************9986 PP
2	Myb_DNA-binding	54.7	2.4e-17	81	124	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g +T+eE++++++++++lG++ W++ a++++ gRt++++k++w++ XP_022752436.1 81 KGVFTPEEEQRIIELHAKLGNK-WARMAAELP-GRTDNEIKNYWNT 124 789*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 488 aa Download sequence
MSKCHSDLSL VEEVSSRGNM RESSHMKKGP WTSAEDAILV DYVKKHGEGN WNAVQKNSGL 60 SRCGKSCRLR WANHLRPDLK KGVFTPEEEQ RIIELHAKLG NKWARMAAEL PGRTDNEIKN 120 YWNTRIKRLQ RAGLPIYPPD VCLLMNRSQE ESHNVASMPT RNSFGSNLLH SDAFEIPQVE 180 FENLELNQQI LSSPALLDIP AKTMLKRVVG PSHGYGLMFP IAHPPKRLRE SVSSYLSMPN 240 QLTEYAYKKR YDEPYKLSSP YDSDLSTNDL SSFGIPPGSN ALLDSNFSPP EPMSGPIKLE 300 LPSYQYSDIQ QDSWGNPAVP LPLVESVDTV IQSPSMERVK SDCFTSQNTG LLEAVLYESQ 360 KLNSSKDDSF QQSSSTSMLD DVANFPLKHC EIELEAHCDP NSPLAHSATS VLSEYTPVGG 420 SSSDEPQFVE SILRCKGKKE IPNQMADSRL DDFLEPGQFG HENRCVRDKP IVIDAIAALL 480 GEDTGCGY

Sequence ? help Back to Top

Protein Sequence Length: 488 aa Download sequence

MSKCHSDLSL VEEVSSRGNM RESSHMKKGP WTSAEDAILV DYVKKHGEGN WNAVQKNSGL  60
SRCGKSCRLR WANHLRPDLK KGVFTPEEEQ RIIELHAKLG NKWARMAAEL PGRTDNEIKN  120
YWNTRIKRLQ RAGLPIYPPD VCLLMNRSQE ESHNVASMPT RNSFGSNLLH SDAFEIPQVE  180
FENLELNQQI LSSPALLDIP AKTMLKRVVG PSHGYGLMFP IAHPPKRLRE SVSSYLSMPN  240
QLTEYAYKKR YDEPYKLSSP YDSDLSTNDL SSFGIPPGSN ALLDSNFSPP EPMSGPIKLE  300
LPSYQYSDIQ QDSWGNPAVP LPLVESVDTV IQSPSMERVK SDCFTSQNTG LLEAVLYESQ  360
KLNSSKDDSF QQSSSTSMLD DVANFPLKHC EIELEAHCDP NSPLAHSATS VLSEYTPVGG  420
SSSDEPQFVE SILRCKGKKE IPNQMADSRL DDFLEPGQFG HENRCVRDKP IVIDAIAALL  480
GEDTGCGY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11440.1	4e-86	MYB family protein