PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022752446.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

ARF

Protein Properties

Length: 796aa MW: 88040.6 Da PI: 6.7781

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022752446.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	75.8	5e-24	163	264	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 f+k+lt sd++++g +++p++ ae++ ++++ s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv++++L +gD v+F + +++ XP_022752446.1 163 FCKTLTASDTSTHGGFSVPRRAAEDCfppldYKQTRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVAGDAVLFL--RGEDG 255 99**************************8444556789********************************************..44999 PP ..EEEEE-S CS B3 91 elvvkvfrk 99 el+++++r+ XP_022752446.1 256 ELRLGIRRS 264 9***996 PP
2	Auxin_resp	125.1	4.7e-41	289	370	1	82
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 +a+a+stksvF+v+Y+Pras++eFv++++k+ k+++++v++G+Rfkm+fe++ds+err+sG+v+g++dldp+rWpnSkWr+L XP_022752446.1 289 VANAISTKSVFHVFYSPRASHAEFVIPFQKYIKSITNPVCMGTRFKMRFEMDDSPERRYSGVVTGIRDLDPYRWPNSKWRCL 370 689******************************************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 796 aa Download sequence
MEIDLNHAVN EVEKTALCNG DCDKASACVH CLSSSSSSNS ASPPCSSSMY LELWHACAGP 60 LTSLPKKGNV VVYFPQGHLE QFASTSHFSP MEMPTFDLPP QIFCKVVNVQ LLANKENDEV 120 YTKVTLLPEP ELGGPNLEGK QLDELGVDGG GGGLPTKSTP HMFCKTLTAS DTSTHGGFSV 180 PRRAAEDCFP PLDYKQTRPS QELVAKDLHG VEWRFRHIYR GQPRRHLLTT GWSIFVSQKN 240 LVAGDAVLFL RGEDGELRLG IRRSIRPRNG LPDSVIAKQN SYPNLLSPVA NAISTKSVFH 300 VFYSPRASHA EFVIPFQKYI KSITNPVCMG TRFKMRFEMD DSPERRYSGV VTGIRDLDPY 360 RWPNSKWRCL MVRWDEDIVS DHQDRVSPWE IDTSVSLPPL SIQSSPRLKK LRTSLQAAAP 420 DTPITGGGGF LDFEESVRSS KVLQGQENVG LVSLLYGRDT VDHPPDFEMR SLAHQSLAST 480 GIGKTNIIEF MRARSTAYTG FAESNRFPKV LQGQEVCPLR SLTPKADLNL DVWAKTNLGC 540 NSFNIHQAQT NCYPLASEGL RNMYFPYTDI YKAGQDPSIS SYASTLPRGN VSFNGSSIKT 600 GVIVDRVRKP SQLHEHKSLE NISSPAFGKK LMNQQDDCLK GNVVGCKLFG FSLTAESPNP 660 NSQNSGKRSC TKVHKQGSLV GRAIDLSRLY GYDDLMTELE CLFSMEGLLS DPNKGWRVLY 720 TDSENDVMVV GDDPWHEFCD VVSKIHIYTQ EEVEKMTIGV ASDDTQSCLE QAPVIMEASK 780 SSSVGQPDSS PTVIRV

Sequence ? help Back to Top

Protein Sequence Length: 796 aa Download sequence

MEIDLNHAVN EVEKTALCNG DCDKASACVH CLSSSSSSNS ASPPCSSSMY LELWHACAGP  60
LTSLPKKGNV VVYFPQGHLE QFASTSHFSP MEMPTFDLPP QIFCKVVNVQ LLANKENDEV  120
YTKVTLLPEP ELGGPNLEGK QLDELGVDGG GGGLPTKSTP HMFCKTLTAS DTSTHGGFSV  180
PRRAAEDCFP PLDYKQTRPS QELVAKDLHG VEWRFRHIYR GQPRRHLLTT GWSIFVSQKN  240
LVAGDAVLFL RGEDGELRLG IRRSIRPRNG LPDSVIAKQN SYPNLLSPVA NAISTKSVFH  300
VFYSPRASHA EFVIPFQKYI KSITNPVCMG TRFKMRFEMD DSPERRYSGV VTGIRDLDPY  360
RWPNSKWRCL MVRWDEDIVS DHQDRVSPWE IDTSVSLPPL SIQSSPRLKK LRTSLQAAAP  420
DTPITGGGGF LDFEESVRSS KVLQGQENVG LVSLLYGRDT VDHPPDFEMR SLAHQSLAST  480
GIGKTNIIEF MRARSTAYTG FAESNRFPKV LQGQEVCPLR SLTPKADLNL DVWAKTNLGC  540
NSFNIHQAQT NCYPLASEGL RNMYFPYTDI YKAGQDPSIS SYASTLPRGN VSFNGSSIKT  600
GVIVDRVRKP SQLHEHKSLE NISSPAFGKK LMNQQDDCLK GNVVGCKLFG FSLTAESPNP  660
NSQNSGKRSC TKVHKQGSLV GRAIDLSRLY GYDDLMTELE CLFSMEGLLS DPNKGWRVLY  720
TDSENDVMVV GDDPWHEFCD VVSKIHIYTQ EEVEKMTIGV ASDDTQSCLE QAPVIMEASK  780
SSSVGQPDSS PTVIRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60450.1	0.0	ARF family protein