PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022752528.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

E2F/DP

Protein Properties

Length: 465aa MW: 51821 Da PI: 4.5024

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022752528.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	86	2.8e-27	143	208	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i+wkg XP_022752528.1 143 RYDSSLGLLTKKFINLIKQAEDGILDLNKAADTL---EV--QKRRIYDITNVLEGVGLIEKKLKNRIQWKG 208 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 465 aa Download sequence
MSGSQAPEQL KQSMQQRQNQ QPLKRQLPFS MKPPFMAPGG DYHRFASTEP YRIADQEAEA 60 IVVKSPLKRK SDIADREVEP NEWAMPPGCT EVVSSPLQTP VAGKGGKAQK TSRLAKISKS 120 GPQTPASNLG SPGNNLTPAG PCRYDSSLGL LTKKFINLIK QAEDGILDLN KAADTLEVQK 180 RRIYDITNVL EGVGLIEKKL KNRIQWKGLD VSRPGEIDES VATLQAEVEN LSIEEHRLDE 240 QIRVMQERLR DLSEDENNQK WLFVTEEDIK SLPCFQNETL IAIKAPHGTT LEVPDPDEQA 300 VDYPQRRYRI VLRSSMGPID VYLVSQFEEK FEEIQGVDPP PNFPSTSGLN DNPATTMVTE 360 ESRGKEIEMQ GQDTNRMCSD LNSSQDFVSG IMKIVPSDVD IDADYWLLSD PSVSITDMWR 420 TEPGVEWNEF DTVHDDYGMA AVGTPHPQTP PSNATEVPSA NSTER

Sequence ? help Back to Top

Protein Sequence Length: 465 aa Download sequence

MSGSQAPEQL KQSMQQRQNQ QPLKRQLPFS MKPPFMAPGG DYHRFASTEP YRIADQEAEA  60
IVVKSPLKRK SDIADREVEP NEWAMPPGCT EVVSSPLQTP VAGKGGKAQK TSRLAKISKS  120
GPQTPASNLG SPGNNLTPAG PCRYDSSLGL LTKKFINLIK QAEDGILDLN KAADTLEVQK  180
RRIYDITNVL EGVGLIEKKL KNRIQWKGLD VSRPGEIDES VATLQAEVEN LSIEEHRLDE  240
QIRVMQERLR DLSEDENNQK WLFVTEEDIK SLPCFQNETL IAIKAPHGTT LEVPDPDEQA  300
VDYPQRRYRI VLRSSMGPID VYLVSQFEEK FEEIQGVDPP PNFPSTSGLN DNPATTMVTE  360
ESRGKEIEMQ GQDTNRMCSD LNSSQDFVSG IMKIVPSDVD IDADYWLLSD PSVSITDMWR  420
TEPGVEWNEF DTVHDDYGMA AVGTPHPQTP PSNATEVPSA NSTER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22220.2	1e-174	E2F/DP family protein