PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022752573.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family LBD
Protein Properties Length: 222aa    MW: 24275.4 Da    PI: 7.5853
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022752573.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26091.31.2e-282104198
          DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 
                     +C++C+vlr++C++ Cvl+  +     p++q +++ +++k+FG+s +l+l++++pe +r+ +++sl+yeA+ r  +Pv+Gavg++++++++++q+
  XP_022752573.1   2 SCNGCRVLRKGCSETCVLRSSIswidtPEAQGNATLFLAKFFGRSDLLSLISSVPEPQRPVLFQSLLYEACGRSVNPVNGAVGLLSNGNWHICQA 96 
                     6********************************************************************************************** PP

          DUF260  91 kaelallk 98 
                     ++e++l++
  XP_022752573.1  97 AVETVLQG 104
                     **998875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MSCNGCRVLR KGCSETCVLR SSISWIDTPE AQGNATLFLA KFFGRSDLLS LISSVPEPQR  60
PVLFQSLLYE ACGRSVNPVN GAVGLLSNGN WHICQAAVET VLQGGALRPI QEILAGVSTS  120
SCDDLSDRFC ANSCNFQSRY AQSKPLMTTM MMENQSVLTA SDLSLSLTTK FGGGRRGTGR  180
EYEEEKKRAK TVSFYSEESG KTTSESNEND GRQERKILNL FV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49940.11e-62LBD family protein