PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022752662.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HD-ZIP

Protein Properties

Length: 273aa MW: 30620.6 Da PI: 8.4017

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022752662.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	62.1	8.2e-20	128	182	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq +Le+ F+++++++ ++++ LA++l+L rqV vWFqNrRa+ k XP_022752662.1 128 RKKLRLTKEQSAILEDSFKQHSTLNPKQKQALAEQLNLRPRQVEVWFQNRRARTK 182 78889************************************************98 PP
2	HD-ZIP_I/II	124.6	4.7e-40	128	216	1	90
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 +kk+rl+keq+++LE+sF+++++L+p++K++la++L+l+prqv+vWFqnrRARtk+kq+E+d+e Lk+++++l+een+rL+ke +eL+ + XP_022752662.1 128 RKKLRLTKEQSAILEDSFKQHSTLNPKQKQALAEQLNLRPRQVEVWFQNRRARTKLKQTEVDCELLKKCCETLTEENKRLQKELQELK-S 216 69*************************************************************************************9.4 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
MGFDDLCNTG LGLGLGLGLG LGCLVNQENF SQSQHQQKKK KLFLKHDHIF PSLTLGPSVD 60 IYQSAKKIDA RKVHGESNDL HQQASSLSAV SSFSNSSVKK EKDFGGEEVE LERVSSRISD 120 EDEEGSPRKK LRLTKEQSAI LEDSFKQHST LNPKQKQALA EQLNLRPRQV EVWFQNRRAR 180 TKLKQTEVDC ELLKKCCETL TEENKRLQKE LQELKSLKLT ASYYMQLPAA TLTMCPSCER 240 IANGGEDSST SSPFTIGQKS HFLNRFTHSS TAC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	177	185	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37790.1	9e-65	HD-ZIP family protein