PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022752732.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 708aa    MW: 79901 Da    PI: 5.7855
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022752732.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS380.22.5e-1163357043374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     +lL++cA+av+ +d++ a++lL+++s+++s +gd +qRla+yf +AL++rla+++   y+ l +++ts    ++ l+a+++++ ++P+ k+ ++ 
  XP_022752732.1 335 SLLTQCAQAVAINDQRTANELLKQISQHSSDSGDGTQRLAHYFSNALKTRLAGMGAPSYSPLVSNRTS---AADILKAYRVYVLACPFKKMFNFY 426
                     79*********************************************************999988888...9*********************** PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     aN+ I+e +e+++++Hi+Df+i +G+QWp+L+q L++R++gpp+l iTgv+ p++g   +e++eetg+rL++++e+++vpfe+nv +ak++e+++
  XP_022752732.1 427 ANKKIMEVAEKATTLHIVDFGICYGFQWPCLIQRLSARAGGPPKLHITGVEFPQPGfrPAERVEETGRRLKRYCERFKVPFEYNV-IAKKWETIK 520
                     *******************************************************9****************************9.7******** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                     leeL++k++E+++Vn++++l++l+d++++ +s+rd+vLkl++s++P+++++   +  +n++ F++rf eal ++sa fd +ea+++re+ +r++ 
  XP_022752732.1 521 LEELKIKKDEVVVVNCMYRLKNLPDDTMAPTSARDTVLKLIRSINPELFIHGIANGTYNAPFFVTRFREALFHFSAQFDIFEANVGREDPQRMMF 615
                     *********************************************************************************************** PP

            GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     E+e+ g++i+nvvaceg+er+er et+++W++r  +aGFk vpl+++ +k++  +++  + + + v+ +  ++++gWk+r ++++S W+
  XP_022752732.1 616 EKEIHGKDIMNVVACEGSERVERPETYKQWQARTLRAGFKLVPLDQELVKKVTNMVQSSYHKDFIVDVDGRWMLQGWKGRVIFALSIWK 704
                     ************************************************************888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 708 aa     Download sequence    
MDTLSQDFPS FTYGFKFDHG SVPVYSNHNL VNGFENSPEH IVPTLPSFPT SPESLVDSAS  60
SSGMSSDGHP LDNIPFANEM LKYINEMLME EDLEEKTCML QDCLALQAAE KSFYEVLGHE  120
YPLSSDPISL CPSQDHYSPD DNLTQSSSGS SNSYTVSTNS VESCGIDSPG EFNSSYSQTS  180
LIDSLERTSL FPDLQGETMK EPLRHFRREI GEASKSSLNV DKLLLAAESN LSGPSLPDGR  240
YQSLSASRER KNYQRDDGDY LEEGRSNKQS ALSLEDSEQS EMFDDVLLCK GEHEDWPNCS  300
LYGNSQQNGQ LKGSNSGTTR RKKNGKTSEV VDLWSLLTQC AQAVAINDQR TANELLKQIS  360
QHSSDSGDGT QRLAHYFSNA LKTRLAGMGA PSYSPLVSNR TSAADILKAY RVYVLACPFK  420
KMFNFYANKK IMEVAEKATT LHIVDFGICY GFQWPCLIQR LSARAGGPPK LHITGVEFPQ  480
PGFRPAERVE ETGRRLKRYC ERFKVPFEYN VIAKKWETIK LEELKIKKDE VVVVNCMYRL  540
KNLPDDTMAP TSARDTVLKL IRSINPELFI HGIANGTYNA PFFVTRFREA LFHFSAQFDI  600
FEANVGREDP QRMMFEKEIH GKDIMNVVAC EGSERVERPE TYKQWQARTL RAGFKLVPLD  660
QELVKKVTNM VQSSYHKDFI VDVDGRWMLQ GWKGRVIFAL SIWKPVRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29060.10.0GRAS family protein