PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022752733.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 650aa    MW: 73404.7 Da    PI: 5.9093
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022752733.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS380.52e-1162776463374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     +lL++cA+av+ +d++ a++lL+++s+++s +gd +qRla+yf +AL++rla+++   y+ l +++ts    ++ l+a+++++ ++P+ k+ ++ 
  XP_022752733.1 277 SLLTQCAQAVAINDQRTANELLKQISQHSSDSGDGTQRLAHYFSNALKTRLAGMGAPSYSPLVSNRTS---AADILKAYRVYVLACPFKKMFNFY 368
                     79*********************************************************999988888...9*********************** PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     aN+ I+e +e+++++Hi+Df+i +G+QWp+L+q L++R++gpp+l iTgv+ p++g   +e++eetg+rL++++e+++vpfe+nv +ak++e+++
  XP_022752733.1 369 ANKKIMEVAEKATTLHIVDFGICYGFQWPCLIQRLSARAGGPPKLHITGVEFPQPGfrPAERVEETGRRLKRYCERFKVPFEYNV-IAKKWETIK 462
                     *******************************************************9****************************9.7******** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                     leeL++k++E+++Vn++++l++l+d++++ +s+rd+vLkl++s++P+++++   +  +n++ F++rf eal ++sa fd +ea+++re+ +r++ 
  XP_022752733.1 463 LEELKIKKDEVVVVNCMYRLKNLPDDTMAPTSARDTVLKLIRSINPELFIHGIANGTYNAPFFVTRFREALFHFSAQFDIFEANVGREDPQRMMF 557
                     *********************************************************************************************** PP

            GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     E+e+ g++i+nvvaceg+er+er et+++W++r  +aGFk vpl+++ +k++  +++  + + + v+ +  ++++gWk+r ++++S W+
  XP_022752733.1 558 EKEIHGKDIMNVVACEGSERVERPETYKQWQARTLRAGFKLVPLDQELVKKVTNMVQSSYHKDFIVDVDGRWMLQGWKGRVIFALSIWK 646
                     ************************************************************888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 650 aa     Download sequence    
MDTLSQDFPS FTYGFKFDHG SVPVYSNHNL VNGFENSPEH IVPTLPSFPT SPESLVDSAS  60
SSGMSSDGHP LDNIPFANEM LKYINEMLME EDLEEKTCML QDCLALQAAE KSFYEVLGHE  120
YPLSSDPISL CPSQDHYSPD DNLTQSSSGS SNSYTVSTNS VESCGIDSPE SNLSGPSLPD  180
GRYQSLSASR ERKNYQRDDG DYLEEGRSNK QSALSLEDSE QSEMFDDVLL CKGEHEDWPN  240
CSLYGNSQQN GQLKGSNSGT TRRKKNGKTS EVVDLWSLLT QCAQAVAIND QRTANELLKQ  300
ISQHSSDSGD GTQRLAHYFS NALKTRLAGM GAPSYSPLVS NRTSAADILK AYRVYVLACP  360
FKKMFNFYAN KKIMEVAEKA TTLHIVDFGI CYGFQWPCLI QRLSARAGGP PKLHITGVEF  420
PQPGFRPAER VEETGRRLKR YCERFKVPFE YNVIAKKWET IKLEELKIKK DEVVVVNCMY  480
RLKNLPDDTM APTSARDTVL KLIRSINPEL FIHGIANGTY NAPFFVTRFR EALFHFSAQF  540
DIFEANVGRE DPQRMMFEKE IHGKDIMNVV ACEGSERVER PETYKQWQAR TLRAGFKLVP  600
LDQELVKKVT NMVQSSYHKD FIVDVDGRWM LQGWKGRVIF ALSIWKPVRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-171GRAS family protein