PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022752864.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HD-ZIP

Protein Properties

Length: 277aa MW: 31910.4 Da PI: 4.8802

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022752864.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55	1.4e-17	57	110	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ q+++Le+ Fe ++++ e++ +LA++lgL+ rqV +WFqNrR ++k XP_022752864.1 57 KKRRLSIGQVKALEKNFELENKLEPERKVKLAEELGLQPRQVAIWFQNRRSRWK 110 45578889*********************************************9 PP
2	HD-ZIP_I/II	125.5	2.3e-40	56	147	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekkrrls qvk+LE++Fe e+kLeperKv+la+eLglqprqva+WFqnrR R+ktkqlEkdy+ Lk++ydal+ + ++Le+e+e+L+++l XP_022752864.1 56 EKKRRLSIGQVKALEKNFELENKLEPERKVKLAEELGLQPRQVAIWFQNRRSRWKTKQLEKDYAILKANYDALQLDYNNLEQEKEALTAKLI 147 69**************************************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence
MKRLSSSGSL DALISICPPK EEKNSKKKQI YSREFQAMLD GLEEEDSLEE AGQATEKKRR 60 LSIGQVKALE KNFELENKLE PERKVKLAEE LGLQPRQVAI WFQNRRSRWK TKQLEKDYAI 120 LKANYDALQL DYNNLEQEKE ALTAKLIELK DKLKEENSES SHSIKEDSPN FSQQNKEHDF 180 RDNDDDSNGI NKEESNANAQ LLISPASSSF QFNGSSSSSD SSNHHWFQPF DSRTILGNMY 240 HPQLVKVEEQ CMFTAEESCN FFSVDQAPTL QWYFPGQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	57	86	KKRRLSIGQVKALEKNFELENKLEPERKVK
2	105	113	RRSRWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22430.1	2e-37	HD-ZIP family protein