PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022752874.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 276aa    MW: 31781.2 Da    PI: 4.9546
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022752874.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox551.4e-1756109356
                     --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     k+++++  q+++Le+ Fe ++++  e++ +LA++lgL+ rqV +WFqNrR ++k
  XP_022752874.1  56 KKRRLSIGQVKALEKNFELENKLEPERKVKLAEELGLQPRQVAIWFQNRRSRWK 109
                     45578889*********************************************9 PP
2HD-ZIP_I/II125.52.3e-4055146192
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                     ekkrrls  qvk+LE++Fe e+kLeperKv+la+eLglqprqva+WFqnrR R+ktkqlEkdy+ Lk++ydal+ + ++Le+e+e+L+++l 
  XP_022752874.1  55 EKKRRLSIGQVKALEKNFELENKLEPERKVKLAEELGLQPRQVAIWFQNRRSRWKTKQLEKDYAILKANYDALQLDYNNLEQEKEALTAKLI 146
                     69**************************************************************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MKRLSSSGSL DALISICPPK EKNSKKKQIY SREFQAMLDG LEEEDSLEEA GQATEKKRRL  60
SIGQVKALEK NFELENKLEP ERKVKLAEEL GLQPRQVAIW FQNRRSRWKT KQLEKDYAIL  120
KANYDALQLD YNNLEQEKEA LTAKLIELKD KLKEENSESS HSIKEDSPNF SQQNKEHDFR  180
DNDDDSNGIN KEESNANAQL LISPASSSFQ FNGSSSSSDS SNHHWFQPFD SRTILGNMYH  240
PQLVKVEEQC MFTAEESCNF FSVDQAPTLQ WYFPGQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15685KKRRLSIGQVKALEKNFELENKLEPERKVK
2104112RRSRWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22430.13e-37HD-ZIP family protein