PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022752909.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 320aa    MW: 36206.4 Da    PI: 7.8927
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022752909.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding491.4e-151462148
                     TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W++eEd +l+++++++G+g +W + +++ g++R++k+c++rw++yl
   XP_022752909.1 14 KGPWSPEEDSKLKEYIEKYGTGgNWIAFPQKAGLKRCGKSCRLRWLNYL 62
                     79*********************************************97 PP
2Myb_DNA-binding41.33.6e-1369111246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      g +T eEd ++  +++  G++ W+ Ia+ ++ gRt++++k++w++
   XP_022752909.1  69 GEFTDEEDRIICTLFASIGSR-WSVIAAQLP-GRTDNDIKNYWNT 111
                      78*******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MGRAPCCDKA NVKKGPWSPE EDSKLKEYIE KYGTGGNWIA FPQKAGLKRC GKSCRLRWLN  60
YLRPNIKHGE FTDEEDRIIC TLFASIGSRW SVIAAQLPGR TDNDIKNYWN TKLRKKLMAM  120
TSQSQRKPPP FPSSHHTPPV SSQSFSSLYK GCTSFYTPTR SFTAFEPISS VQSDLLNNNN  180
TNLAANSSLI HTPESLVSHT QYYPVKENFL IFGSEPSCSS SDGSCSQISY GREIKQEDMG  240
FQGFGVSNGY EENHKFMLSY GTNNGGENVN QWTEKLSGSY GECPLDYDLE DVRRLISSSS  300
NSCFIDENKT QEKVMHYYYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57620.17e-78MYB family protein