PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022752923.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family LBD
Protein Properties Length: 165aa    MW: 18472 Da    PI: 6.733
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022752923.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260143.28.1e-4561061101
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +Ca+Ck+lrr+C+kdC++apyfp+++p kfa+vhk+FGasnv+k+l++lp ++r da+ssl+yeA+ar+rdPvyG+vg i+ lq+q++ql+ +la
  XP_022752923.1   6 PCASCKLLRRRCTKDCIFAPYFPSDDPYKFAIVHKVFGASNVSKMLQELPVHQRADAVSSLAYEANARVRDPVYGCVGAISFLQNQVSQLQMQLA 100
                     7********************************************************************************************** PP

          DUF260  96 llkeel 101
                     ++++e+
  XP_022752923.1 101 VAQNEI 106
                     *99975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MGCSSPCASC KLLRRRCTKD CIFAPYFPSD DPYKFAIVHK VFGASNVSKM LQELPVHQRA  60
DAVSSLAYEA NARVRDPVYG CVGAISFLQN QVSQLQMQLA VAQNEILCIQ MQQESAWPTL  120
IDHQQDDKSF LLATNNLDNI SQYLNFASSS NVIQDAALKR ESFWT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30130.13e-76LBD family protein