PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022752927.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

WRKY

Protein Properties

Length: 596aa MW: 65562.7 Da PI: 7.2027

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022752927.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.2	6.9e-33	258	315	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers d++++ei+Y+g+Hnh+k XP_022752927.1 258 EDGYNWRKYGQKQVKGSENPRSYYKCTYTNCPTKKKVERSL-DGQITEIVYKGSHNHPK 315 7**************************************.*************85 PP
2	WRKY	105.9	2.1e-33	426	484	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct++gCpv+k+ver+++d ++v++tYeg+Hnh+ XP_022752927.1 426 LDDGYRWRKYGQKVVKGNPNPRSYYKCTYPGCPVRKHVERASHDLRAVITTYEGKHNHD 484 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 596 aa Download sequence
MASSCSSLDT SANSHPQNGF SFFTHPFMTT SFSDLLASGA TDNENPSSAV NGGLDAKHGG 60 RLSLSDRIAQ RTGSGVPKFK SLPPPSLPIS PPPVSPSSYF AIPPGLSPAE LLDSPVLLNA 120 FNVLPSPTTG TFPAQAFNWK SNSANNQQNV KQEDKNYSDF SFQTHPRPAT SSSSMFQSST 180 NTNQTVQRQQ AWSFHESAKQ EDFSSGKSMV KPEYTQMQSI SPEIANIQSN SQSNSSFQSD 240 YCNYQQQSQS VRESRRSEDG YNWRKYGQKQ VKGSENPRSY YKCTYTNCPT KKKVERSLDG 300 QITEIVYKGS HNHPKPQSTR RSSSSISIQN SSAASSEILD QSLAIHGSGQ MDSVATPENS 360 SISVGDDDFD QGSQKSKSGG DEFDEDEPEA KRWKSEGENE GISAPGSRTV REPRVVVQTT 420 SDIDILDDGY RWRKYGQKVV KGNPNPRSYY KCTYPGCPVR KHVERASHDL RAVITTYEGK 480 HNHDVPAARG SHSVNRPLPD NNNNGNNNAA MAIRPSAVNN HSNNSMTNPL RSLRPAEAEG 540 ESPFMLEMLQ GTGNFGFLGF GNSMGSFMNQ PQDVNKMFSR TKEEPRDEVF IEPLPY

Sequence ? help Back to Top

Protein Sequence Length: 596 aa Download sequence

MASSCSSLDT SANSHPQNGF SFFTHPFMTT SFSDLLASGA TDNENPSSAV NGGLDAKHGG  60
RLSLSDRIAQ RTGSGVPKFK SLPPPSLPIS PPPVSPSSYF AIPPGLSPAE LLDSPVLLNA  120
FNVLPSPTTG TFPAQAFNWK SNSANNQQNV KQEDKNYSDF SFQTHPRPAT SSSSMFQSST  180
NTNQTVQRQQ AWSFHESAKQ EDFSSGKSMV KPEYTQMQSI SPEIANIQSN SQSNSSFQSD  240
YCNYQQQSQS VRESRRSEDG YNWRKYGQKQ VKGSENPRSY YKCTYTNCPT KKKVERSLDG  300
QITEIVYKGS HNHPKPQSTR RSSSSISIQN SSAASSEILD QSLAIHGSGQ MDSVATPENS  360
SISVGDDDFD QGSQKSKSGG DEFDEDEPEA KRWKSEGENE GISAPGSRTV REPRVVVQTT  420
SDIDILDDGY RWRKYGQKVV KGNPNPRSYY KCTYPGCPVR KHVERASHDL RAVITTYEGK  480
HNHDVPAARG SHSVNRPLPD NNNNGNNNAA MAIRPSAVNN HSNNSMTNPL RSLRPAEAEG  540
ESPFMLEMLQ GTGNFGFLGF GNSMGSFMNQ PQDVNKMFSR TKEEPRDEVF IEPLPY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-107	WRKY family protein