PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022753188.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 586aa    MW: 65537.2 Da    PI: 6.4128
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022753188.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS427.79.3e-1312135821373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL++cA+a+s++++ + ++l+ + +  +s +g+p++Rl ay++e+L ar   s+s +y++l+++e +    ++ l+++++++e++P+lkf++
  XP_022753188.1 213 LKQLLIACAKALSENKMDEFDKLILKARAAVSIRGEPIERLGAYMVEGLVARKEASGSIIYRSLHCREPE---GKDLLSYMQILYEICPYLKFGY 304
                     689******************************************************************9...9********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     ++aN aI ea  +e+r+HiiDf+i qG+QW++LlqaLasRp+g+p++RiTg+++p s+  +   le++++rLa + e++++p+ef+  v     d
  XP_022753188.1 305 MAANGAIAEACRTEDRIHIIDFQIAQGTQWVTLLQALASRPGGAPHIRITGIDDPVSNyaRGGGLEAVERRLAALSEKFNIPVEFRG-VPVFAPD 398
                     *******************************************************99999999************************.688899* PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     ++ ++L+v+pgEalaVn+ lqlh+++desv+++++rde+L++vkslsPkv ++ve+e+++n+++Fl rf+e+leyy a+f+s++++lpr+++eri
  XP_022753188.1 399 IKRDMLDVRPGEALAVNFPLQLHHTPDESVDVNNPRDELLRMVKSLSPKVTTLVEHESNTNTAPFLPRFIETLEYYLAMFESIDETLPRDQKERI 493
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     ++E+++l+reivnv+aceg+er+erhe ++kW++rl++aGF+++pls+++++ +++llr +++  y++ e++g+++lgWkdr+L+s+SaW
  XP_022753188.1 494 NMEQHCLAREIVNVIACEGKERVERHELFGKWKSRLTMAGFRQYPLSSYVNSVIRSLLRYYSK-HYTLVEKDGAMLLGWKDRNLISASAW 582
                     ***********************************************************9995.5************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 586 aa     Download sequence    
MDSHRLFSYG VTGAGISYST SYSTVPSIPN RLFSSLKSDI GNSPNSPFCT QFDFGTITTL  60
SDSLEQHSST DNLSGLSPSC NSSLESNTYF HRLSPSLDCR RESVPLFSGG TYIQDANSSH  120
KIIYTLQELE TALMAPDEDE VTTPNISCGE SSGPHTTDQR SRAWSQERQG SLVLQPQTSF  180
ISRHRQSTEV AQVEKRQKAI EDLSLQGIPP GNLKQLLIAC AKALSENKMD EFDKLILKAR  240
AAVSIRGEPI ERLGAYMVEG LVARKEASGS IIYRSLHCRE PEGKDLLSYM QILYEICPYL  300
KFGYMAANGA IAEACRTEDR IHIIDFQIAQ GTQWVTLLQA LASRPGGAPH IRITGIDDPV  360
SNYARGGGLE AVERRLAALS EKFNIPVEFR GVPVFAPDIK RDMLDVRPGE ALAVNFPLQL  420
HHTPDESVDV NNPRDELLRM VKSLSPKVTT LVEHESNTNT APFLPRFIET LEYYLAMFES  480
IDETLPRDQK ERINMEQHCL AREIVNVIAC EGKERVERHE LFGKWKSRLT MAGFRQYPLS  540
SYVNSVIRSL LRYYSKHYTL VEKDGAMLLG WKDRNLISAS AWHCGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.11e-176GRAS family protein