PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022753276.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family SBP
Protein Properties Length: 239aa    MW: 27020.2 Da    PI: 9.7928
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022753276.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP137.34.5e-43116192278
                     -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
             SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                     Cqve+C  dls+ak+yhrrhkvCe+hska+vv+v+g++qrfCqqCsrfhelsefDe+krsCrrrLa+hnerrrk++a
  XP_022753276.1 116 CQVEKCGLDLSDAKRYHRRHKVCEIHSKAQVVVVAGMRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKSSA 192
                     **************************************************************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MFHVVLNLFF TXFSFHLFFI SSKSHKHCFQ HFITTPLFIA PSPAMEATGF RRKSALKANM  60
SKDFIAEDLD NDMEEEEEEE GVGDQGFPDD EKRKKAYGKR GSSSGVGGGG VSPPSCQVEK  120
CGLDLSDAKR YHRRHKVCEI HSKAQVVVVA GMRQRFCQQC SRFHELSEFD EAKRSCRRRL  180
AGHNERRRKS SAESSAEGSS RKGTSPQLKE SHFKQADDQR ARVPIAIPGN SSFKRSQIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15270.11e-38SBP family protein