PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022753538.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 636aa MW: 71481.7 Da PI: 10.3812

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022753538.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.8	2.5e-08	12	42	4	35
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgR 35 W t E++ll++av+++G+++W++Ia +++ +R XP_022753538.1 12 WGTLEELLLACAVNRHGTNSWDSIALELQ-NR 42 9999************************9.77 PP

Sequence ? help Back to Top
Protein Sequence Length: 636 aa Download sequence
MAREHKTSAQ LWGTLEELLL ACAVNRHGTN SWDSIALELQ NRRICSSSSS LLPSFTPQLC 60 QDKFMDLKRR FISPNDAAFS SSLVDQLRRI RVEELRREVQ QRDVSIVSLE LKVKRLVEER 120 ERSLKDETDL DDRQNNLPPQ IIAGKHTAGE DSGDIGDRSF NESNSTSQKP EDATTTTTTT 180 TTIVKDEQND EGEVVGQKKA QVKTEPVEPG AANESDLVRT GKGPGNERVN GEEPNNKKQM 240 SDVQSSSSLS KKKRRSGSSR GESSSGEERE ENEFSPAKMR VSAVKPESLI RLLRIIRSHR 300 LGSAFDRRQR SQESERYKNL IKQHMDLQRI QSRLDKGVYS GCTTKFFRDL LLLFNNITVF 360 HRQTSPEYIA AQELRALVLK EMSDKLRKHS LQLMTLKPET DQPPVSLSKP NKSSTIVACS 420 KRSSIKALAQ NATRRGDKKE REIEEKPKET EKVDTSSFVG IDDKGIGKKR SKERAVSGRR 480 NSLRASSKNG ETKHEYGGNE LSSHDALELK VDKKENMARK KQGAASFLQR MKQNSPSKVT 540 EKDDNNDYDD DDVDDSDDES KDSKEKARGR RREVKRVTRS SGGRGAREES GRVKRGVGRP 600 SKRAAAESTT GKRGRDNVEN EVGVGGTGRA RKRSRR

Sequence ? help Back to Top

Protein Sequence Length: 636 aa Download sequence

MAREHKTSAQ LWGTLEELLL ACAVNRHGTN SWDSIALELQ NRRICSSSSS LLPSFTPQLC  60
QDKFMDLKRR FISPNDAAFS SSLVDQLRRI RVEELRREVQ QRDVSIVSLE LKVKRLVEER  120
ERSLKDETDL DDRQNNLPPQ IIAGKHTAGE DSGDIGDRSF NESNSTSQKP EDATTTTTTT  180
TTIVKDEQND EGEVVGQKKA QVKTEPVEPG AANESDLVRT GKGPGNERVN GEEPNNKKQM  240
SDVQSSSSLS KKKRRSGSSR GESSSGEERE ENEFSPAKMR VSAVKPESLI RLLRIIRSHR  300
LGSAFDRRQR SQESERYKNL IKQHMDLQRI QSRLDKGVYS GCTTKFFRDL LLLFNNITVF  360
HRQTSPEYIA AQELRALVLK EMSDKLRKHS LQLMTLKPET DQPPVSLSKP NKSSTIVACS  420
KRSSIKALAQ NATRRGDKKE REIEEKPKET EKVDTSSFVG IDDKGIGKKR SKERAVSGRR  480
NSLRASSKNG ETKHEYGGNE LSSHDALELK VDKKENMARK KQGAASFLQR MKQNSPSKVT  540
EKDDNNDYDD DDVDDSDDES KDSKEKARGR RREVKRVTRS SGGRGAREES GRVKRGVGRP  600
SKRAAAESTT GKRGRDNVEN EVGVGGTGRA RKRSRR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	251	255	KKKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42150.1	2e-35	MYB_related family protein