PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022753576.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 456aa MW: 51843 Da PI: 5.2462

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022753576.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	68.8	1e-21	123	219	1	85
trihelix 1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfd 83 +Wt++ v++Li+++ ++++ + +kk++W+ vsk m ++g+++sp+qC++k+++lnkrykk++++ +++ +++++++ ++ d XP_022753576.1 123 KWTDNVVRLLIAVVACVGDDGMIEGveglqrksgivQKKGKWKTVSKIMISKGCHVSPQQCEDKFNDLNKRYKKLNDILGRGtSCRVVENPSLMD 217 7************777777754334455566788********************************************6699999999998 PP trihelix 84 ql 85 ++ XP_022753576.1 218 SM 219 88 PP

Sequence ? help Back to Top
Protein Sequence Length: 456 aa Download sequence
MDNSGLGGGF LSGPDGRLFD LESSVHRQHQ SQLGQPSMMP HNHMIMTTGL ENEHRSIGLM 60 EAKGTNPKGC SMNFGKGAEV SPIITMTNGS MSEEDEPSYN EDGNGENSNG GKGKKRSPWQ 120 RMKWTDNVVR LLIAVVACVG DDGMIEGVEG LQRKSGIVQK KGKWKTVSKI MISKGCHVSP 180 QQCEDKFNDL NKRYKKLNDI LGRGTSCRVV ENPSLMDSMP HLSAKAKDDV KKILSSKHLF 240 YQEMCAYHNG QRIPNCQDLD LLGCSIPIER CLKDNNGSDE EEDEGNDDSE DDDEIDKEDD 300 NNAVCEEEGI GELHERKKAS AEEGHFWSES AGKDSFKVEM AGIFQDPARS SLERKEWIKR 360 QMLQRQEERV NLQAEAFDLE KQRFKWLRYC NKKDRELESL RLENERMRLE NEQRILQLRQ 420 RELEVGYRRS DASLDPTSLG IDRLQSRDQI DMGWHQ

Sequence ? help Back to Top

Protein Sequence Length: 456 aa Download sequence

MDNSGLGGGF LSGPDGRLFD LESSVHRQHQ SQLGQPSMMP HNHMIMTTGL ENEHRSIGLM  60
EAKGTNPKGC SMNFGKGAEV SPIITMTNGS MSEEDEPSYN EDGNGENSNG GKGKKRSPWQ  120
RMKWTDNVVR LLIAVVACVG DDGMIEGVEG LQRKSGIVQK KGKWKTVSKI MISKGCHVSP  180
QQCEDKFNDL NKRYKKLNDI LGRGTSCRVV ENPSLMDSMP HLSAKAKDDV KKILSSKHLF  240
YQEMCAYHNG QRIPNCQDLD LLGCSIPIER CLKDNNGSDE EEDEGNDDSE DDDEIDKEDD  300
NNAVCEEEGI GELHERKKAS AEEGHFWSES AGKDSFKVEM AGIFQDPARS SLERKEWIKR  360
QMLQRQEERV NLQAEAFDLE KQRFKWLRYC NKKDRELESL RLENERMRLE NEQRILQLRQ  420
RELEVGYRRS DASLDPTSLG IDRLQSRDQI DMGWHQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	6e-64	Trihelix family protein