PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022753591.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 319aa    MW: 36087.4 Da    PI: 9.6213
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022753591.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.14.1e-181863147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     rg W + Ede+l ++v+q+G  +W++Ia++++ gR++k+c++rw++ 
   XP_022753591.1 18 RGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQ-GRSGKSCRLRWFNQ 63
                     899*****************************.***********996 PP
2Myb_DNA-binding56.28.1e-1870113146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      r ++T+ E+e+l+ a++ +G++ W++Iar ++ gRt++ +k++w+ 
   XP_022753591.1  70 RRPFTEVEEERLLAAHRIHGNK-WALIARLFP-GRTDNAVKNHWHV 113
                      679*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MEDSGAASSD DVKSSCPRGH WRPAEDEKLR QLVEQYGAQN WNSIAEKLQG RSGKSCRLRW  60
FNQLDPRINR RPFTEVEEER LLAAHRIHGN KWALIARLFP GRTDNAVKNH WHVIMARKQR  120
EQSKLCGKRS FQDGLSDSKL SSRIGFGDCK FFEFQNPSKD RIFCVSSSST SSPSWTCASS  180
TMMASNNSSS DKLLRRDGKD YLLASGSSYY SMDSSTFLEQ SLYKYHSNAS AYCSRFRNSS  240
TFGLPKYRRV VPSRFGYLKL GDNSESNNGV MKEELMSFTD NAPKLANIRL SSLQPEQEDE  300
SIKTKGVPFI DFLGVGISS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17950.15e-67MYB family protein