PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022753605.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

TCP

Protein Properties

Length: 190aa MW: 20923.9 Da PI: 9.2244

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022753605.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	105.5	8.5e-33	32	123	5	66
TCP 5 kdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..............................s 66 ++ ++++h+kv+gRdRR+Rl+ caar+F+L++eLG+++d++ti WLl+qa+p+i+++tgt XP_022753605.1 32 RKITKDRHAKVDGRDRRIRLPPICAARIFQLTRELGYKTDGETIAWLLRQAEPSIIAATGTgialpssspvlsnptslvpfssepplllsdY 123 5679*********************************************************7755544444433333333333333332222 PP

Sequence ? help Back to Top
Protein Sequence Length: 190 aa Download sequence
MASKNMSLEM ALSNASTRKR RPFSQNKLVT SRKITKDRHA KVDGRDRRIR LPPICAARIF 60 QLTRELGYKT DGETIAWLLR QAEPSIIAAT GTGIALPSSS PVLSNPTSLV PFSSEPPLLL 120 SDYSPSSNSC KPKVVPDNQD TLKNCVVSRA EPTLPPFEFD LVANFELEFS PNEIAMLQSV 180 TGSYDKEGKD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	3e-32	TCP family protein