PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022753660.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 432aa MW: 48750.5 Da PI: 8.5987

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022753660.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.8	7.6e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+ +++ +G+g +W + ++++g++R++k+c++rw++yl XP_022753660.1 14 KGPWSPEEDAKLKAYIENYGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	37	8.1e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ XP_022753660.1 69 GGFSEEEDNIICSLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDAKLKAYIE NYGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEDNIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLLGR 120 RKESNSNRLW CSSQYPSEAN GASDNKYFSQ GLRTSTLERL QLHMKLQSLQ NPFSSYNNPA 180 PRPKIHPLQE KMIQNIQASK GSSNLRVQPL LPNPQAENEQ SADDFYDQAS LAQRQDYPKT 240 INAKGLELDN SLDEISPSDG SVPFGTGDNL MDSEIMPKAD SNHHGLAQLT NAALQPVSNF 300 QAELDEFLNN KTTGYAPQED QMADQFDCFK EINGSKDNLI WWSSEFDAKS SSSNSWDSNS 360 VHLSYGMFQN QKVTEGLWLW GCMKRSWSGS GDVLRAVRKP RIQCSRITRH HDNLRGAHQE 420 GRDGKDGFVN RI

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

MGRAPCCDKA NVKKGPWSPE EDAKLKAYIE NYGTGGNWIA LPQKIGLKRC GKSCRLRWLN  60
YLRPNIKHGG FSEEEDNIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLLGR  120
RKESNSNRLW CSSQYPSEAN GASDNKYFSQ GLRTSTLERL QLHMKLQSLQ NPFSSYNNPA  180
PRPKIHPLQE KMIQNIQASK GSSNLRVQPL LPNPQAENEQ SADDFYDQAS LAQRQDYPKT  240
INAKGLELDN SLDEISPSDG SVPFGTGDNL MDSEIMPKAD SNHHGLAQLT NAALQPVSNF  300
QAELDEFLNN KTTGYAPQED QMADQFDCFK EINGSKDNLI WWSSEFDAKS SSSNSWDSNS  360
VHLSYGMFQN QKVTEGLWLW GCMKRSWSGS GDVLRAVRKP RIQCSRITRH HDNLRGAHQE  420
GRDGKDGFVN RI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	1e-92	MYB family protein