PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022753700.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 470aa    MW: 52711.8 Da    PI: 5.8269
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022753700.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS465.23.8e-142454671374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lLl+cA++v++g+le+a+  L+++s+laspdgd+mqR+aayfteALa r+++ +++l +al++++ +   +see+ ++klf+e++P+lk+++
  XP_022753700.1  45 LIHLLLTCANHVATGSLENANISLEQISQLASPDGDTMQRMAAYFTEALADRILKGWPGLHNALNSTKIT--LVSEEVLVRKLFFEMFPFLKVAF 137
                     689*************************************************************999998..79********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     +++NqaI ea+ege++vHiiD+++ ++ QW+aL+qaL++Rpegpp+lRiTg+++    +ke l ++++rL++ Ae+l++pf+fn+ ++++le+l+
  XP_022753700.1 138 VLTNQAIIEAMEGEKMVHIIDLNAAEPSQWIALIQALSARPEGPPHLRITGIHQ----QKEVLDQMAHRLTEQAEKLDIPFQFNP-IVSKLENLD 227
                     ******************************************************....9**************************.7999***** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrll..........................................................desvsleserdev 227
                     +e+Lrvk+gEala+++vlqlh ll                                                           +++s++   d++
  XP_022753700.1 228 TEKLRVKTGEALAISSVLQLHLLLasddellrkksplasknldgihlqralqlnqstlgellekdmvngcspspdsasssplWSTASVK--ADSF 320
                     ****************************************************************************8876654444444..599* PP

            GRAS 228 LklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleea 322
                     L+++++lsPk++vv+eq+++hn+++++er+le+l++y+alfd+le++++++s er kvE++l+g+ei+n++acegaer+erhe+lekW +rl+ a
  XP_022753700.1 321 LNALWGLSPKLMVVTEQDSNHNGSTLMERLLESLYFYAALFDCLESTVSKASLERLKVEKMLFGEEIKNIIACEGAERKERHEKLEKWIQRLDLA 415
                     *********************************************************************************************** PP

            GRAS 323 GFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      F++vpls++ + qa++ll+ ++ dgy+++ee+g++v++W+d pL+s+SaWr
  XP_022753700.1 416 SFGNVPLSYYGMLQARRLLQGYNCDGYKMKEENGCVVICWQDGPLFSISAWR 467
                     ***************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 470 aa     Download sequence    
MFQDESSSVI SSPLQVFSMM SLSSKLGSPY PWLRELKSEE RGLYLIHLLL TCANHVATGS  60
LENANISLEQ ISQLASPDGD TMQRMAAYFT EALADRILKG WPGLHNALNS TKITLVSEEV  120
LVRKLFFEMF PFLKVAFVLT NQAIIEAMEG EKMVHIIDLN AAEPSQWIAL IQALSARPEG  180
PPHLRITGIH QQKEVLDQMA HRLTEQAEKL DIPFQFNPIV SKLENLDTEK LRVKTGEALA  240
ISSVLQLHLL LASDDELLRK KSPLASKNLD GIHLQRALQL NQSTLGELLE KDMVNGCSPS  300
PDSASSSPLW STASVKADSF LNALWGLSPK LMVVTEQDSN HNGSTLMERL LESLYFYAAL  360
FDCLESTVSK ASLERLKVEK MLFGEEIKNI IACEGAERKE RHEKLEKWIQ RLDLASFGNV  420
PLSYYGMLQA RRLLQGYNCD GYKMKEENGC VVICWQDGPL FSISAWRCRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.10.0GRAS family protein