PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022753713.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family LBD
Protein Properties Length: 209aa    MW: 22817.9 Da    PI: 5.7451
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022753713.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260136.97.4e-43481471100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+lrr+Ca++Cvlapyfp ++p+kf ++h++FGasn++k+l++lpe++r da+ss+vyeA ar+rdPvyG++g i +lq+q+++l+a+la
  XP_022753713.1  48 PCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEASARIRDPVYGCAGAICQLQKQVNELQAQLA 142
                     7********************************************************************************************** PP

          DUF260  96 llkee 100
                     ++++e
  XP_022753713.1 143 KAQAE 147
                     99976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MFKMEYSDQA TPATTTTTTT TFSPQSLSPN SSPSPPSPTL TPPVVISPCA ACKILRRRCA  60
DKCVLAPYFP PTEPAKFTIA HRVFGASNII KFLQELPESQ RADAVSSMVY EASARIRDPV  120
YGCAGAICQL QKQVNELQAQ LAKAQAEVIN MQLQQANLAA LLCMEVAQSP QPNSQQSVDT  180
FISSPQSYHS NPSFMEDNNL GSLWETLWT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28500.12e-61LBD family protein