PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022753722.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family YABBY
Protein Properties Length: 188aa    MW: 21044.5 Da    PI: 8.3761
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022753722.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY235.81e-7221622170
           YABBY   2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsv 96 
                     +++ +se+v yv+CnfCntilavsvP tslf+ vtvrCGhC++llsvn+ ++ q+++ ++      +e ++++ ++++++++sn+ + +s++  +
  XP_022753722.1   2 SLDLASERVVYVHCNFCNTILAVSVPCTSLFNNVTVRCGHCANLLSVNMGTSLQTVPIQDA-----QELQKQQINTDQDHYHSNKDSGSSSKC-N 90 
                     567799*****************************************************97.....222333334444444444333222222.2 PP

           YABBY  97 sseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                     + ++  ++ ++e+pr+pp irPPekrqrvPsaynrfikeeiqrikasnPdishreafs+aaknWahfP+ih+gl
  XP_022753722.1  91 K-FSAFDSAEDEAPRMPP-IRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHYGL 162
                     2.22346778899**999.9****************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MSLDLASERV VYVHCNFCNT ILAVSVPCTS LFNNVTVRCG HCANLLSVNM GTSLQTVPIQ  60
DAQELQKQQI NTDQDHYHSN KDSGSSSKCN KFSAFDSAED EAPRMPPIRP PEKRQRVPSA  120
YNRFIKEEIQ RIKASNPDIS HREAFSTAAK NWAHFPHIHY GLKLDGNKQA KTDQAFAGQG  180
TQKSNGYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08465.12e-84YABBY family protein